Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 RNU6-45P-201ENST00000384471 107 ntBASIC0.84□□□□□ -2.27
USF2Q15853 SNORD115.1-201ENST00000391109 76 ntBASIC0.84□□□□□ -2.27
USF2Q15853 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.84□□□□□ -2.27
USF2Q15853 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC060773.1-201ENST00000421698 310 ntBASIC0.84□□□□□ -2.27
USF2Q15853 snoU109.3-201ENST00000459477 145 ntBASIC0.84□□□□□ -2.27
USF2Q15853 RPS23P5-201ENST00000495419 428 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC011406.1-201ENST00000512440 370 ntBASIC0.84□□□□□ -2.27
USF2Q15853 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
USF2Q15853 RNU6-685P-201ENST00000517088 95 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.84□□□□□ -2.27
USF2Q15853 EIF4A1P12-201ENST00000551910 141 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC090517.1-201ENST00000569307 266 ntBASIC0.84□□□□□ -2.27
USF2Q15853 CTHRC1P1-201ENST00000605383 469 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC105129.3-201ENST00000605455 485 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
USF2Q15853 RNU4-5P-201ENST00000607255 135 ntBASIC0.84□□□□□ -2.27
USF2Q15853 AL031667.3-201ENST00000620124 655 ntBASIC0.84□□□□□ -2.27
USF2Q15853 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
USF2Q15853 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
USF2Q15853 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USF2Q15853 RNU6-418P-201ENST00000384035 107 ntBASIC0.83□□□□□ -2.28
USF2Q15853 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.83□□□□□ -2.28
USF2Q15853 AC078809.1-201ENST00000427601 140 ntBASIC0.83□□□□□ -2.28
USF2Q15853 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.83□□□□□ -2.28
USF2Q15853 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.83□□□□□ -2.28
USF2Q15853 RNU6-856P-201ENST00000516959 98 ntBASIC0.83□□□□□ -2.28
USF2Q15853 SUMO2P16-201ENST00000519475 264 ntBASIC0.83□□□□□ -2.28
USF2Q15853 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.83□□□□□ -2.28
USF2Q15853 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.83□□□□□ -2.28
USF2Q15853 AL359999.1-201ENST00000604513 294 ntBASIC0.83□□□□□ -2.28
USF2Q15853 AL031775.1-201ENST00000607014 887 ntBASIC0.83□□□□□ -2.28
USF2Q15853 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.83□□□□□ -2.28
USF2Q15853 Y_RNA.22-201ENST00000362492 102 ntBASIC0.82□□□□□ -2.28
USF2Q15853 U3.4-201ENST00000363352 213 ntBASIC0.82□□□□□ -2.28
USF2Q15853 Y_RNA.226-201ENST00000364337 114 ntBASIC0.82□□□□□ -2.28
USF2Q15853 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
USF2Q15853 Y_RNA.576-201ENST00000384781 102 ntBASIC0.82□□□□□ -2.28
USF2Q15853 MIR1287-201ENST00000408492 90 ntBASIC0.82□□□□□ -2.28
USF2Q15853 RN7SKP61-201ENST00000410642 295 ntBASIC0.82□□□□□ -2.28
USF2Q15853 AC013410.2-201ENST00000422627 201 ntBASIC0.82□□□□□ -2.28
USF2Q15853 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.82□□□□□ -2.28
USF2Q15853 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.82□□□□□ -2.28
USF2Q15853 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.82□□□□□ -2.28
USF2Q15853 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.82□□□□□ -2.28
USF2Q15853 SNRPGP9-201ENST00000456025 225 ntBASIC0.82□□□□□ -2.28
USF2Q15853 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.82□□□□□ -2.28
USF2Q15853 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.82□□□□□ -2.28
USF2Q15853 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
USF2Q15853 RNU6-165P-201ENST00000517170 99 ntBASIC0.82□□□□□ -2.28
USF2Q15853 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.82□□□□□ -2.28
USF2Q15853 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.82□□□□□ -2.28
USF2Q15853 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
USF2Q15853 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USF2Q15853 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
USF2Q15853 AC092268.1-201ENST00000342691 405 ntBASIC0.81□□□□□ -2.28
USF2Q15853 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
USF2Q15853 RNU6-545P-201ENST00000362681 104 ntBASIC0.81□□□□□ -2.28
USF2Q15853 RNU6-552P-201ENST00000362869 119 ntBASIC0.81□□□□□ -2.28
USF2Q15853 RNU1-76P-201ENST00000362903 159 ntBASIC0.81□□□□□ -2.28
USF2Q15853 RNU6-83P-201ENST00000384568 112 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AL355143.1-201ENST00000407101 841 ntBASIC0.81□□□□□ -2.28
USF2Q15853 RNU6-387P-201ENST00000411331 105 ntBASIC0.81□□□□□ -2.28
USF2Q15853 USP9YP28-201ENST00000435142 589 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AC244505.5-201ENST00000443639 207 ntBASIC0.81□□□□□ -2.28
USF2Q15853 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.81□□□□□ -2.28
USF2Q15853 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AC091951.3-201ENST00000504093 246 ntBASIC0.81□□□□□ -2.28
USF2Q15853 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
USF2Q15853 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.81□□□□□ -2.28
USF2Q15853 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.81□□□□□ -2.28
USF2Q15853 MIR4509-3-201ENST00000578671 94 ntBASIC0.81□□□□□ -2.28
USF2Q15853 MIR4509-2-201ENST00000583920 94 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AL158050.2-201ENST00000605336 568 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AL121992.2-201ENST00000606262 256 ntBASIC0.81□□□□□ -2.28
USF2Q15853 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AC092140.2-201ENST00000618027 521 ntBASIC0.81□□□□□ -2.28
USF2Q15853 MIR4509-1-201ENST00000618224 94 ntBASIC0.81□□□□□ -2.28
USF2Q15853 AL049777.1-201ENST00000622740 518 ntBASIC0.81□□□□□ -2.28
USF2Q15853 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
USF2Q15853 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
USF2Q15853 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
USF2Q15853 SNORD32A-201ENST00000364805 84 ntBASIC0.8□□□□□ -2.28
USF2Q15853 RNU6-906P-201ENST00000384700 70 ntBASIC0.8□□□□□ -2.28
USF2Q15853 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
USF2Q15853 PIGFP2-201ENST00000421400 651 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.8□□□□□ -2.28
USF2Q15853 AL133217.1-201ENST00000450980 425 ntBASIC0.8□□□□□ -2.28
USF2Q15853 C1DP4-201ENST00000455429 424 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AC007547.1-201ENST00000462177 490 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.8□□□□□ -2.28
USF2Q15853 AC109479.2-201ENST00000517842 174 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AC023050.3-201ENST00000541142 333 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AC090888.2-201ENST00000559765 1144 ntBASIC0.8□□□□□ -2.28
USF2Q15853 TMF1P1-201ENST00000576058 373 ntBASIC0.8□□□□□ -2.28
USF2Q15853 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AC104010.1-201ENST00000616889 150 ntBASIC0.8□□□□□ -2.28
USF2Q15853 AL445984.1-201ENST00000637834 659 ntBASIC0.8□□□□□ -2.28
USF2Q15853 RNU6-1123P-201ENST00000362347 106 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms