Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 Y_RNA.480-201ENST00000384364 102 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 SNORD14D-201ENST00000384390 87 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 Y_RNA.516-201ENST00000384541 124 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 MIR597-201ENST00000384968 97 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 MIR1276-201ENST00000408707 83 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU2-29P-201ENST00000410423 189 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 POLHP1-201ENST00000411806 470 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 AP000275.1-201ENST00000411943 390 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.77□□□□□ -2.13
CSTF1Q05048 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.77□□□□□ -2.13
CSTF1Q05048 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.77□□□□□ -2.13
CSTF1Q05048 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.77□□□□□ -2.13
CSTF1Q05048 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.77□□□□□ -2.13
CSTF1Q05048 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.77□□□□□ -2.13
CSTF1Q05048 uc_338.5-201ENST00000611839 155 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 MIR6504-201ENST00000613520 61 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 AL132822.1-201ENST00000617063 513 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 MIR1248-201ENST00000629190 106 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 SNORD98-201ENST00000636377 67 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CSTF1Q05048 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CSTF1Q05048 Y_RNA.296-201ENST00000364930 108 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 Y_RNA.582-201ENST00000391023 95 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 MTCO3P41-201ENST00000414801 328 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CSTF1Q05048 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AL590135.1-201ENST00000422215 156 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AL358453.1-201ENST00000422522 250 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC019205.3-201ENST00000424573 156 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 USP9YP18-201ENST00000425912 695 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC073464.1-201ENST00000429823 534 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 IFNA20P-201ENST00000436840 528 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC016700.2-201ENST00000446011 156 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
CSTF1Q05048 RPS3AP17-201ENST00000472594 777 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC015911.1-201ENST00000495111 156 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC145146.1-201ENST00000496370 254 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC109479.2-201ENST00000517842 174 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC115990.1-201ENST00000526957 301 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 HSPE1P4-201ENST00000550617 308 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 TRAV32-201ENST00000553993 340 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC007375.1-201ENST00000554513 578 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.76□□□□□ -2.13
CSTF1Q05048 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 BNIP3P25-201ENST00000596023 559 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AL034555.1-201ENST00000604816 211 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AC007684.1-201ENST00000609671 477 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 U2.17-201ENST00000611454 95 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 AL354950.2-201ENST00000617939 290 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSTF1Q05048 AC233981.2-201ENST00000611524 1614 ntBASIC1.76□□□□□ -2.13
CSTF1Q05048 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSTF1Q05048 MTND4P23-201ENST00000447723 1363 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 RNU6-43P-201ENST00000384302 107 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 Y_RNA.554-201ENST00000384672 102 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 MIR7-2-201ENST00000384970 110 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 SNORD37.1-201ENST00000390968 65 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 RNA5SP465-201ENST00000391195 109 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 RNU6-903P-201ENST00000391270 109 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AC002486.1-201ENST00000435098 391 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AC244670.1-201ENST00000436879 112 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.75□□□□□ -2.13
CSTF1Q05048 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.75□□□□□ -2.13
CSTF1Q05048 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.75□□□□□ -2.13
CSTF1Q05048 AC093259.1-201ENST00000509755 300 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AC105417.1-201ENST00000514691 285 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 RN7SKP298-201ENST00000515950 94 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.75□□□□□ -2.13
CSTF1Q05048 AC016957.1-201ENST00000534895 309 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.75□□□□□ -2.13
CSTF1Q05048 HIF1AP1-201ENST00000553642 175 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AL078605.1-201ENST00000603529 500 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 RNU6-85P-201ENST00000605989 107 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 AL022345.1-201ENST00000607292 135 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSTF1Q05048 OR5AK4P-201ENST00000635912 903 ntBASIC1.75□□□□□ -2.13
CSTF1Q05048 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSTF1Q05048 RNU6-996P-201ENST00000365438 107 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 Y_RNA.372-201ENST00000365599 102 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 RNU6-517P-201ENST00000384362 110 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 RNU6-1158P-201ENST00000391167 107 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 RNA5SP212-201ENST00000391223 107 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 MIR1283-2-201ENST00000408621 87 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.74□□□□□ -2.13
CSTF1Q05048 AL121601.2-201ENST00000438019 707 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.74□□□□□ -2.13
CSTF1Q05048 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms