Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 MTCO3P8-201ENST00000453691 755 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 snoU13.6-201ENST00000458785 104 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AIG1P1-201ENST00000503376 148 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 ANXA2P1-201ENST00000505539 926 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 RNA5SP356-201ENST00000515972 94 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 RNU6-911P-201ENST00000516523 104 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AC243829.7-201ENST00000633081 225 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDC42EP1Q00587 AL109809.4-201ENST00000603520 2185 ntBASIC3.14□□□□□ -1.91
CDC42EP1Q00587 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.40-201ENST00000362645 93 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 RNU4-56P-201ENST00000364700 142 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 SNORA51.11-201ENST00000384442 131 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.526-201ENST00000384572 110 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.557-201ENST00000384680 107 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 RNU6-1105P-201ENST00000384774 107 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 RNA5SP184-201ENST00000411071 108 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AL358176.2-201ENST00000425769 204 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC063976.3-201ENST00000426849 329 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 Z98742.2-201ENST00000431564 187 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 SNORA31.6-201ENST00000516241 130 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AL117187.1-201ENST00000555482 181 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 MIR3162-201ENST00000581818 82 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 MIR3136-201ENST00000583498 78 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 RPL12P50-201ENST00000603116 116 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 Z98751.3-201ENST00000604447 521 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 MIR6852-201ENST00000621699 66 ntBASIC3.13□□□□□ -1.91
CDC42EP1Q00587 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
CDC42EP1Q00587 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RNU6-222P-201ENST00000362438 107 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RNU6-1159P-201ENST00000362933 107 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.153-201ENST00000363615 91 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RNU6-541P-201ENST00000384709 110 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC012306.1-201ENST00000423267 114 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 USP9YP16-201ENST00000430287 407 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 USP9YP23-201ENST00000455085 407 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC093852.1-201ENST00000503587 266 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RNU5F-2P-201ENST00000516066 82 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RNU6-567P-201ENST00000516746 107 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC090617.3-201ENST00000573670 475 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 RPS29P30-201ENST00000600975 111 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 AL359854.1-201ENST00000614203 1594 ntBASIC3.12□□□□□ -1.91
CDC42EP1Q00587 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
CDC42EP1Q00587 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 RNU1-35P-201ENST00000362782 153 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 RNU1-57P-201ENST00000384491 166 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 MIR512-1-201ENST00000384913 84 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 MIR186-201ENST00000384988 86 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 U8.20-201ENST00000459445 131 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 SCARNA17.1-201ENST00000516211 143 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 SCARNA17.2-201ENST00000516334 143 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.715-201ENST00000517082 110 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC008269.2-201ENST00000561915 1105 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 MIR4765-201ENST00000585007 77 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AL078605.1-201ENST00000603529 500 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC006023.1-201ENST00000603944 259 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AL034555.1-201ENST00000604816 211 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 SCARNA17.4-201ENST00000614296 143 ntBASIC3.11□□□□□ -1.91
CDC42EP1Q00587 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC42EP1Q00587 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms