Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.12□□□□□ -2.39
LSM3P62310 FAM106DP-201ENST00000586416 501 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC008752.3-201ENST00000588113 712 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC174048.1-201ENST00000603389 144 ntBASIC0.12□□□□□ -2.39
LSM3P62310 Z83818.1-201ENST00000603584 150 ntBASIC0.12□□□□□ -2.39
LSM3P62310 Z98751.3-201ENST00000604447 521 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC064872.1-201ENST00000604823 1072 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC092354.1-201ENST00000606057 376 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC245297.2-201ENST00000610119 565 ntBASIC0.12□□□□□ -2.39
LSM3P62310 AC243829.6-201ENST00000612652 106 ntBASIC0.12□□□□□ -2.39
LSM3P62310 7SK.10-201ENST00000621414 298 ntBASIC0.12□□□□□ -2.39
LSM3P62310 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.12□□□□□ -2.39
LSM3P62310 AC103706.2-201ENST00000638080 240 ntBASIC0.12□□□□□ -2.39
LSM3P62310 BX322639.1-202ENST00000423987 2213 ntBASIC0.11□□□□□ -2.39
LSM3P62310 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.11□□□□□ -2.39
LSM3P62310 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.11□□□□□ -2.39
LSM3P62310 RNU6-43P-201ENST00000384302 107 ntBASIC0.11□□□□□ -2.39
LSM3P62310 RNU6-378P-201ENST00000384324 107 ntBASIC0.11□□□□□ -2.39
LSM3P62310 RNU6-692P-201ENST00000384496 107 ntBASIC0.11□□□□□ -2.39
LSM3P62310 RNU6-950P-201ENST00000384651 107 ntBASIC0.11□□□□□ -2.39
LSM3P62310 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
LSM3P62310 RNU4-22P-201ENST00000411058 166 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC244098.3-201ENST00000424803 96 ntBASIC0.11□□□□□ -2.39
LSM3P62310 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.11□□□□□ -2.39
LSM3P62310 FABP5P4-201ENST00000437203 171 ntBASIC0.11□□□□□ -2.39
LSM3P62310 HMGN2P34-201ENST00000437647 269 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.11□□□□□ -2.39
LSM3P62310 AL133217.1-201ENST00000450980 425 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.11□□□□□ -2.39
LSM3P62310 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.11□□□□□ -2.39
LSM3P62310 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.11□□□□□ -2.39
LSM3P62310 AC022493.2-201ENST00000506122 481 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.11□□□□□ -2.39
LSM3P62310 MTND3P13-201ENST00000574391 343 ntBASIC0.11□□□□□ -2.39
LSM3P62310 MIR4778-201ENST00000577635 80 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC097065.2-201ENST00000608159 533 ntBASIC0.11□□□□□ -2.39
LSM3P62310 PCGEM1.1-201ENST00000613431 131 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC243829.3-201ENST00000622177 108 ntBASIC0.11□□□□□ -2.39
LSM3P62310 AC006927.4-201ENST00000639187 543 ntBASIC0.11□□□□□ -2.39
LSM3P62310 RNU1-76P-201ENST00000362903 159 ntBASIC0.1□□□□□ -2.39
LSM3P62310 Y_RNA.132-201ENST00000363421 102 ntBASIC0.1□□□□□ -2.39
LSM3P62310 U3.9-201ENST00000363823 204 ntBASIC0.1□□□□□ -2.39
LSM3P62310 RNU6-609P-201ENST00000365459 107 ntBASIC0.1□□□□□ -2.39
LSM3P62310 RNA5SP222-201ENST00000411039 105 ntBASIC0.1□□□□□ -2.39
LSM3P62310 AL606662.1-201ENST00000445763 553 ntBASIC0.1□□□□□ -2.39
LSM3P62310 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
LSM3P62310 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
LSM3P62310 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.1□□□□□ -2.39
LSM3P62310 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.1□□□□□ -2.39
LSM3P62310 MTATP6P3-201ENST00000581686 676 ntBASIC0.1□□□□□ -2.39
LSM3P62310 AC097478.2-201ENST00000610572 514 ntBASIC0.1□□□□□ -2.39
LSM3P62310 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.1□□□□□ -2.39
LSM3P62310 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.1□□□□□ -2.39
LSM3P62310 RNU6-105P-201ENST00000363909 104 ntBASIC0.09□□□□□ -2.4
LSM3P62310 RNU6-621P-201ENST00000364752 109 ntBASIC0.09□□□□□ -2.4
LSM3P62310 SNORA72.2-201ENST00000365028 127 ntBASIC0.09□□□□□ -2.4
LSM3P62310 RNU6-769P-201ENST00000384407 104 ntBASIC0.09□□□□□ -2.4
LSM3P62310 RNA5SP467-201ENST00000391274 118 ntBASIC0.09□□□□□ -2.4
LSM3P62310 RPL17P50-201ENST00000396131 546 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.09□□□□□ -2.4
LSM3P62310 AC010975.2-201ENST00000427781 588 ntBASIC0.09□□□□□ -2.4
LSM3P62310 HSFY7P-201ENST00000432672 318 ntBASIC0.09□□□□□ -2.4
LSM3P62310 USP9YP28-201ENST00000435142 589 ntBASIC0.09□□□□□ -2.4
LSM3P62310 HSFY8P-201ENST00000437934 318 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.09□□□□□ -2.4
LSM3P62310 AC016717.1-201ENST00000448918 286 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.09□□□□□ -2.4
LSM3P62310 snoU13.25-201ENST00000458945 104 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC007547.1-201ENST00000462177 490 ntBASIC0.09□□□□□ -2.4
LSM3P62310 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.09□□□□□ -2.4
LSM3P62310 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.09□□□□□ -2.4
LSM3P62310 AK3P2-201ENST00000507976 429 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC067942.3-201ENST00000512025 362 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC011195.1-201ENST00000578177 177 ntBASIC0.09□□□□□ -2.4
LSM3P62310 MIR544B-201ENST00000582372 78 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC078795.3-201ENST00000602913 472 ntBASIC0.09□□□□□ -2.4
LSM3P62310 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.09□□□□□ -2.4
LSM3P62310 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.09□□□□□ -2.4
LSM3P62310 CASC19-280ENST00000642102 1351 ntBASIC0.08□□□□□ -2.4
LSM3P62310 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LSM3P62310 snoU2-30.2-201ENST00000362805 70 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-960P-201ENST00000364056 120 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU4-76P-201ENST00000364509 141 ntBASIC0.08□□□□□ -2.4
LSM3P62310 Y_RNA.311-201ENST00000365068 96 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-1235P-201ENST00000384559 107 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-417P-201ENST00000384712 107 ntBASIC0.08□□□□□ -2.4
LSM3P62310 USP9YP11-201ENST00000427537 717 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AC244670.1-201ENST00000436879 112 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-498P-201ENST00000459468 107 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.08□□□□□ -2.4
LSM3P62310 AC025465.4-201ENST00000513422 638 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-123P-201ENST00000516163 102 ntBASIC0.08□□□□□ -2.4
LSM3P62310 RNU6-1069P-201ENST00000516612 133 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AC027419.1-201ENST00000522976 328 ntBASIC0.08□□□□□ -2.4
LSM3P62310 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
LSM3P62310 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.08□□□□□ -2.4
LSM3P62310 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.08□□□□□ -2.4
LSM3P62310 AC023827.1-201ENST00000569247 97 ntBASIC0.08□□□□□ -2.4
LSM3P62310 AL596327.1-201ENST00000603629 213 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms