Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC004584.2-201ENST00000570407 410 ntBASIC2.2□□□□□ -2.06
LMO4P61968 AC006600.1-201ENST00000572529 153 ntBASIC2.2□□□□□ -2.06
LMO4P61968 AC016727.2-201ENST00000603988 621 ntBASIC2.2□□□□□ -2.06
LMO4P61968 AP000787.2-201ENST00000604432 568 ntBASIC2.2□□□□□ -2.06
LMO4P61968 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.2□□□□□ -2.06
LMO4P61968 HMGB1P24-202ENST00000615653 685 ntBASIC2.2□□□□□ -2.06
LMO4P61968 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.2□□□□□ -2.06
LMO4P61968 AL138825.1-201ENST00000618587 192 ntBASIC2.2□□□□□ -2.06
LMO4P61968 U2.1-201ENST00000618978 145 ntBASIC2.2□□□□□ -2.06
LMO4P61968 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.2□□□□□ -2.06
LMO4P61968 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LMO4P61968 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
LMO4P61968 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.2□□□□□ -2.06
LMO4P61968 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.2□□□□□ -2.06
LMO4P61968 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
LMO4P61968 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LMO4P61968 MTND5P9-201ENST00000503854 1755 ntBASIC2.19□□□□□ -2.06
LMO4P61968 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LMO4P61968 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LMO4P61968 Y_RNA.307-201ENST00000365022 117 ntBASIC2.19□□□□□ -2.06
LMO4P61968 Y_RNA.476-201ENST00000384347 108 ntBASIC2.19□□□□□ -2.06
LMO4P61968 MIR625-201ENST00000385047 85 ntBASIC2.19□□□□□ -2.06
LMO4P61968 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.19□□□□□ -2.06
LMO4P61968 DYNLT3P2-201ENST00000442517 295 ntBASIC2.19□□□□□ -2.06
LMO4P61968 AL078601.1-201ENST00000444542 271 ntBASIC2.19□□□□□ -2.06
LMO4P61968 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LMO4P61968 OR2AQ1P-201ENST00000451972 200 ntBASIC2.19□□□□□ -2.06
LMO4P61968 RNU7-169P-201ENST00000459456 61 ntBASIC2.19□□□□□ -2.06
LMO4P61968 U8.21-201ENST00000459536 136 ntBASIC2.19□□□□□ -2.06
LMO4P61968 AC133134.1-201ENST00000466800 359 ntBASIC2.19□□□□□ -2.06
LMO4P61968 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.19□□□□□ -2.06
LMO4P61968 RNU6-572P-201ENST00000516724 80 ntBASIC2.19□□□□□ -2.06
LMO4P61968 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.19□□□□□ -2.06
LMO4P61968 MIR5701-3-201ENST00000578890 82 ntBASIC2.19□□□□□ -2.06
LMO4P61968 MIR5701-1-201ENST00000585138 82 ntBASIC2.19□□□□□ -2.06
LMO4P61968 MIR8076-201ENST00000611401 83 ntBASIC2.19□□□□□ -2.06
LMO4P61968 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.19□□□□□ -2.06
LMO4P61968 MIR5701-2-201ENST00000615634 82 ntBASIC2.19□□□□□ -2.06
LMO4P61968 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.19□□□□□ -2.06
LMO4P61968 AC010889.1-201ENST00000566193 2666 ntBASIC2.19□□□□□ -2.06
LMO4P61968 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.19□□□□□ -2.06
LMO4P61968 ZNF299P-201ENST00000406845 1804 ntBASIC2.19□□□□□ -2.06
LMO4P61968 AC004944.1-201ENST00000517807 3059 ntBASIC2.19□□□□□ -2.06
LMO4P61968 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.18□□□□□ -2.06
LMO4P61968 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMO4P61968 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.18□□□□□ -2.06
LMO4P61968 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.18□□□□□ -2.06
LMO4P61968 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LMO4P61968 RNU6-874P-201ENST00000362390 105 ntBASIC2.18□□□□□ -2.06
LMO4P61968 RNU6-428P-201ENST00000362942 107 ntBASIC2.18□□□□□ -2.06
LMO4P61968 SNORD50.1-201ENST00000362987 71 ntBASIC2.18□□□□□ -2.06
LMO4P61968 Y_RNA.152-201ENST00000363578 100 ntBASIC2.18□□□□□ -2.06
LMO4P61968 RNU6-1180P-201ENST00000364935 107 ntBASIC2.18□□□□□ -2.06
LMO4P61968 RNU6-472P-201ENST00000384299 107 ntBASIC2.18□□□□□ -2.06
LMO4P61968 MIR627-201ENST00000384979 97 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AL512633.1-201ENST00000399931 655 ntBASIC2.18□□□□□ -2.06
LMO4P61968 FO393413.1-201ENST00000402892 195 ntBASIC2.18□□□□□ -2.06
LMO4P61968 EIF4EP2-201ENST00000422816 654 ntBASIC2.18□□□□□ -2.06
LMO4P61968 TOMM20P4-201ENST00000427861 435 ntBASIC2.18□□□□□ -2.06
LMO4P61968 MTND3P9-201ENST00000429526 346 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC092423.1-201ENST00000430165 186 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.18□□□□□ -2.06
LMO4P61968 OSTCP8-201ENST00000445117 448 ntBASIC2.18□□□□□ -2.06
LMO4P61968 EEF1B2P7-201ENST00000451177 676 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.18□□□□□ -2.06
LMO4P61968 AC013470.1-201ENST00000453438 462 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC104564.1-201ENST00000493028 407 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.18□□□□□ -2.06
LMO4P61968 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.18□□□□□ -2.06
LMO4P61968 AK3P2-201ENST00000507976 429 ntBASIC2.18□□□□□ -2.06
LMO4P61968 RNU6-703P-201ENST00000516946 107 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.18□□□□□ -2.06
LMO4P61968 AP005902.1-201ENST00000521358 186 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.18□□□□□ -2.06
LMO4P61968 MIR4782-201ENST00000577987 79 ntBASIC2.18□□□□□ -2.06
LMO4P61968 MIR5696-201ENST00000578474 85 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC103810.1-201ENST00000579873 453 ntBASIC2.18□□□□□ -2.06
LMO4P61968 MIR4435-1-201ENST00000582552 80 ntBASIC2.18□□□□□ -2.06
LMO4P61968 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.18□□□□□ -2.06
LMO4P61968 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.18□□□□□ -2.06
LMO4P61968 AL645944.1-201ENST00000603857 493 ntBASIC2.18□□□□□ -2.06
LMO4P61968 RAC1P9-201ENST00000604990 392 ntBASIC2.18□□□□□ -2.06
LMO4P61968 MIR8062-201ENST00000621515 85 ntBASIC2.18□□□□□ -2.06
LMO4P61968 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.18□□□□□ -2.06
LMO4P61968 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMO4P61968 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMO4P61968 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.17□□□□□ -2.06
LMO4P61968 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LMO4P61968 AC008264.2-201ENST00000610193 3731 ntBASIC2.17□□□□□ -2.06
LMO4P61968 RNU6-379P-201ENST00000363813 104 ntBASIC2.17□□□□□ -2.06
LMO4P61968 RNU6-595P-201ENST00000363944 107 ntBASIC2.17□□□□□ -2.06
LMO4P61968 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
LMO4P61968 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LMO4P61968 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.17□□□□□ -2.06
LMO4P61968 ELOCP20-201ENST00000422460 345 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC073910.1-201ENST00000445047 438 ntBASIC2.17□□□□□ -2.06
LMO4P61968 HMGN2P10-201ENST00000448085 265 ntBASIC2.17□□□□□ -2.06
LMO4P61968 AC079354.2-201ENST00000453523 154 ntBASIC2.17□□□□□ -2.06
LMO4P61968 MTCO3P8-201ENST00000453691 755 ntBASIC2.17□□□□□ -2.06
LMO4P61968 snoU109.2-201ENST00000459316 135 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms