Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
SEC61A1P61619 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEC61A1P61619 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.53□□□□□ -2
SEC61A1P61619 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SEC61A1P61619 RNU6-222P-201ENST00000362438 107 ntBASIC2.53□□□□□ -2
SEC61A1P61619 Y_RNA.193-201ENST00000363979 102 ntBASIC2.53□□□□□ -2
SEC61A1P61619 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.53□□□□□ -2
SEC61A1P61619 SNORA36A-201ENST00000384221 132 ntBASIC2.53□□□□□ -2
SEC61A1P61619 RNU6-19P-201ENST00000384718 107 ntBASIC2.53□□□□□ -2
SEC61A1P61619 RN7SKP220-201ENST00000410611 288 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AL358453.1-201ENST00000422522 250 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.53□□□□□ -2
SEC61A1P61619 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.53□□□□□ -2
SEC61A1P61619 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.53□□□□□ -2
SEC61A1P61619 AL513124.1-201ENST00000450410 614 ntBASIC2.53□□□□□ -2
SEC61A1P61619 RN7SKP210-201ENST00000459176 261 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AP001324.2-201ENST00000461163 319 ntBASIC2.53□□□□□ -2
SEC61A1P61619 RPL23AP75-201ENST00000491601 451 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.53□□□□□ -2
SEC61A1P61619 RNU7-175P-201ENST00000515915 61 ntBASIC2.53□□□□□ -2
SEC61A1P61619 SNORA40.14-201ENST00000516543 86 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
SEC61A1P61619 EIF4BP1-201ENST00000554881 351 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
SEC61A1P61619 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.53□□□□□ -2
SEC61A1P61619 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
SEC61A1P61619 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
SEC61A1P61619 AL365361.1-201ENST00000566942 3481 ntBASIC2.53□□□□□ -2
SEC61A1P61619 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
SEC61A1P61619 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.52□□□□□ -2.01
SEC61A1P61619 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
SEC61A1P61619 AP000560.1-201ENST00000624150 1937 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC073325.2-201ENST00000339545 159 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 Y_RNA.26-201ENST00000362539 101 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 U3.13-201ENST00000364804 214 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR487A-201ENST00000385009 80 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 RNU6-1109P-201ENST00000391187 107 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 SAR1AP2-201ENST00000392696 594 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR1252-201ENST00000408861 65 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC114482.1-201ENST00000418010 247 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AL445305.1-201ENST00000432577 575 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.52□□□□□ -2.01
SEC61A1P61619 AP001486.1-201ENST00000463339 476 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AL049873.1-201ENST00000480540 376 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AF186996.7-201ENST00000492781 209 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
SEC61A1P61619 SNORA25.11-201ENST00000515935 105 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 Y_RNA.706-201ENST00000516933 99 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.52□□□□□ -2.01
SEC61A1P61619 HSPE1P4-201ENST00000550617 308 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR3671-201ENST00000580455 88 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 RPL23AP78-201ENST00000599928 470 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC016727.2-201ENST00000603988 621 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 Z98751.3-201ENST00000604447 521 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 AC010205.1-201ENST00000616668 449 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 SNORA43.4-201ENST00000629559 138 ntBASIC2.52□□□□□ -2.01
SEC61A1P61619 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SEC61A1P61619 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.51□□□□□ -2.01
SEC61A1P61619 Y_RNA.222-201ENST00000364264 102 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RNU6-806P-201ENST00000365147 105 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RNU6-1286P-201ENST00000383871 107 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 SNORA29-201ENST00000384183 140 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RNU6-843P-201ENST00000384454 104 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 MIR32-201ENST00000384965 70 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AC096649.2-201ENST00000416186 393 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC104332.2-201ENST00000429959 156 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC022018.1-201ENST00000430685 241 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.51□□□□□ -2.01
SEC61A1P61619 DYNLT3P2-201ENST00000442517 295 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC025750.2-201ENST00000442609 450 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 snoU13.30-201ENST00000458951 104 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC117440.1-201ENST00000474107 571 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RPS29P26-201ENST00000477483 171 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC104564.1-201ENST00000493028 407 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC097462.2-201ENST00000504623 481 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 SNORD19.2-201ENST00000516978 73 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AC007375.1-201ENST00000554513 578 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SEC61A1P61619 AC090517.1-201ENST00000569307 266 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 LARP7P3-201ENST00000579888 337 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SEC61A1P61619 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.51□□□□□ -2.01
SEC61A1P61619 7SK.7-201ENST00000603504 247 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 AL355297.3-201ENST00000604082 446 ntBASIC2.51□□□□□ -2.01
SEC61A1P61619 RAC1P9-201ENST00000604990 392 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms