Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MRPS36P4-201ENST00000534436 298 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.37□□□□□ -2.03
CLDN20P56880 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 MIR3117-201ENST00000584034 78 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AL158827.2-201ENST00000602494 330 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 RPL12P50-201ENST00000603116 116 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AL034555.1-201ENST00000604816 211 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN20P56880 AC084781.2-201ENST00000615568 161 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN20P56880 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 AL691447.3-201ENST00000635020 330 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLDN20P56880 RNU5B-2P-201ENST00000363036 113 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 Y_RNA.431-201ENST00000384086 102 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 RNU6-331P-201ENST00000384724 107 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 SNORA75.6-201ENST00000391318 127 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN20P56880 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN20P56880 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN20P56880 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN20P56880 AL353705.4-201ENST00000449661 238 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 EEF1B2P7-201ENST00000451177 676 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN20P56880 CBX3P8-201ENST00000532412 525 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN20P56880 AC093249.1-201ENST00000567049 203 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AC090616.3-201ENST00000582184 217 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AL670379.2-201ENST00000604983 252 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 AC092608.2-201ENST00000624427 218 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
CLDN20P56880 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.36□□□□□ -2.03
CLDN20P56880 AL136360.1-201ENST00000503377 1900 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN20P56880 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN20P56880 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
CLDN20P56880 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN20P56880 RNU6-595P-201ENST00000363944 107 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 Y_RNA.315-201ENST00000365117 102 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 SNORA36A-201ENST00000384221 132 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 Y_RNA.460-201ENST00000384255 102 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN20P56880 AF228730.4-201ENST00000421457 183 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN20P56880 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN20P56880 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL353752.1-201ENST00000454946 260 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 MTCO3P10-201ENST00000455912 772 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 UBE2DNL-203ENST00000474922 222 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN20P56880 SCARNA16.2-201ENST00000516520 172 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 RN7SKP40-201ENST00000517211 242 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL078605.1-201ENST00000603529 500 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL713866.2-201ENST00000603579 219 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 Z98751.3-201ENST00000604447 521 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL133255.1-201ENST00000606374 441 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 AL050343.2-201ENST00000607338 280 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 SCARNA4-201ENST00000629045 128 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 FO624990.1-201ENST00000636373 85 ntBASIC2.35□□□□□ -2.03
CLDN20P56880 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN20P56880 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
CLDN20P56880 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN20P56880 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN20P56880 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN20P56880 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN20P56880 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN20P56880 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN20P56880 Y_RNA.11-201ENST00000362375 109 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 Y_RNA.187-201ENST00000363918 113 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 RNU4-9P-201ENST00000364951 139 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 RNA5SP494-201ENST00000410653 129 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 RPS20P15-201ENST00000412792 311 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 AL358453.1-201ENST00000422522 250 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 AC012306.1-201ENST00000423267 114 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 RPL23AP75-201ENST00000491601 451 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN20P56880 AC021146.2-201ENST00000504736 556 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 CYP4A27P-201ENST00000567218 190 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 MIR3923-201ENST00000579521 83 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN20P56880 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN20P56880 7SK.7-201ENST00000603504 247 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 AL359314.1-201ENST00000616913 261 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 MIR5739-201ENST00000619803 80 ntBASIC2.34□□□□□ -2.03
CLDN20P56880 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 599 ms