Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN12P56749 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RNU6-533P-201ENST00000384144 107 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RNU6-692P-201ENST00000384496 107 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RNU6-331P-201ENST00000384724 107 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 SNORA40.4-201ENST00000390971 128 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 MIR300-201ENST00000401138 83 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 Y_RNA.608-201ENST00000410647 95 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
CLDN12P56749 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN12P56749 GTF2IP13-201ENST00000438487 386 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC244505.5-201ENST00000443639 207 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN12P56749 COX6CP14-201ENST00000469580 174 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.73□□□□□ -2.29
CLDN12P56749 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN12P56749 AC103851.1-201ENST00000506833 274 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC079140.5-201ENST00000507882 310 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC011406.1-201ENST00000512440 370 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 RNU6-1041P-201ENST00000516254 102 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 CTHRC1P1-201ENST00000605383 469 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC016727.1-205ENST00000605437 569 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC009994.1-201ENST00000606889 253 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 AC064807.4-201ENST00000607201 407 ntBASIC0.73□□□□□ -2.29
CLDN12P56749 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN12P56749 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CLDN12P56749 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CLDN12P56749 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CLDN12P56749 Y_RNA.22-201ENST00000362492 102 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 RNU6-336P-201ENST00000364891 107 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN12P56749 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN12P56749 AC000111.3-201ENST00000433478 193 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 MTND1P18-201ENST00000448191 573 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 EXOSC3P1-201ENST00000448649 500 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 USP9YP25-201ENST00000457708 443 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 RNU6-1053P-201ENST00000515930 101 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN12P56749 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CLDN12P56749 ZNF321P-202ENST00000550843 495 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 AC021231.3-201ENST00000558497 370 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 AC090888.2-201ENST00000559765 1144 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.72□□□□□ -2.29
CLDN12P56749 TMF1P1-201ENST00000576058 373 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
CLDN12P56749 AC098848.2-201ENST00000588023 330 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
CLDN12P56749 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CLDN12P56749 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CLDN12P56749 RNU6-392P-201ENST00000364926 101 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 SNORD114-24-201ENST00000365029 72 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 RNA5SP259-201ENST00000365541 109 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 RNU2-8P-201ENST00000410727 190 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 PIGFP2-201ENST00000421400 651 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 SNAP23P1-201ENST00000433229 246 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 HSPE1P13-201ENST00000451143 297 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 HMGN1P7-201ENST00000491722 313 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 ARL2BPP4-201ENST00000506854 471 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 RNA5SP384-201ENST00000516615 116 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.71□□□□□ -2.3
CLDN12P56749 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.71□□□□□ -2.3
CLDN12P56749 BNIP3P10-201ENST00000605360 577 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 AC126177.8-201ENST00000618339 1015 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 MIR338-201ENST00000636369 67 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 AC068647.2-201ENST00000637380 353 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 AL445984.1-201ENST00000637834 659 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 MTND5P17-201ENST00000418405 1603 ntBASIC0.71□□□□□ -2.3
CLDN12P56749 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-37P-201ENST00000362692 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-11P-201ENST00000364234 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-877P-201ENST00000383868 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-25P-201ENST00000383873 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-1-201ENST00000383898 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-48P-201ENST00000384161 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-36P-201ENST00000384172 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-4P-201ENST00000384205 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-5P-201ENST00000384238 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-3P-201ENST00000384314 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-16P-201ENST00000384385 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-15P-201ENST00000384534 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-2-201ENST00000384627 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-29P-201ENST00000384637 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-9-201ENST00000384776 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-33P-201ENST00000384793 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC060773.1-201ENST00000421698 310 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC010099.3-201ENST00000423896 409 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RAB28P5-201ENST00000427490 651 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.7□□□□□ -2.3
CLDN12P56749 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.7□□□□□ -2.3
CLDN12P56749 SNRPGP7-201ENST00000469016 106 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC116562.3-201ENST00000506136 177 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms