Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 Y_RNA.384-201ENST00000383909 102 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNU6-43P-201ENST00000384302 107 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNU6-1222P-201ENST00000384615 107 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNU6-310P-201ENST00000384655 107 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 MIR544A-201ENST00000384855 91 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNY4P36-201ENST00000391116 96 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 SNORA75.4-201ENST00000391278 119 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 Y_RNA.646-201ENST00000410980 101 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 AC097463.2-201ENST00000421074 142 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RPL23AP95-201ENST00000426806 265 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 Z82205.1-201ENST00000428456 297 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC4P56524 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC4P56524 RNU7-152P-201ENST00000458982 64 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 AC080013.2-201ENST00000460866 323 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 SNORA25.11-201ENST00000515935 105 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNA5SP384-201ENST00000516615 116 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 RNA5SP402-201ENST00000517148 110 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC4P56524 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.65□□□□□ -1.99
HDAC4P56524 AL159153.1-201ENST00000619688 317 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 SNORA43.4-201ENST00000629559 138 ntBASIC2.65□□□□□ -1.99
HDAC4P56524 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC4P56524 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HDAC4P56524 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC4P56524 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC4P56524 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-212P-201ENST00000362642 104 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-227P-201ENST00000362865 103 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-529P-201ENST00000363383 104 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-694P-201ENST00000364071 147 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-596P-201ENST00000365395 98 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-790P-201ENST00000384479 105 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-1072P-201ENST00000384703 107 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNU6-443P-201ENST00000384780 107 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RPL39P29-201ENST00000447779 157 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 AC079354.2-201ENST00000453523 154 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 RPL30P12-201ENST00000474666 353 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 FO393415.2-201ENST00000480085 343 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC4P56524 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC4P56524 AC005741.1-201ENST00000511094 432 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 AC109329.1-201ENST00000518744 317 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC4P56524 MIR5571-201ENST00000577998 113 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 HMGB1P24-202ENST00000615653 685 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 AC092608.2-201ENST00000624427 218 ntBASIC2.64□□□□□ -1.99
HDAC4P56524 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
HDAC4P56524 RNU6-1285P-201ENST00000363480 105 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 RNU1-57P-201ENST00000384491 166 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 SNORA80E-201ENST00000384744 137 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 MIR521-1-201ENST00000384902 87 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HDAC4P56524 U6atac.2-201ENST00000408644 118 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC4P56524 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC4P56524 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC4P56524 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 snoU13.26-201ENST00000459452 105 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 Y_RNA.708-201ENST00000516950 96 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC4P56524 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.63□□□□□ -1.99
HDAC4P56524 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 AC109446.1-201ENST00000566172 220 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC4P56524 MIR4658-201ENST00000584344 65 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC4P56524 AL158827.2-201ENST00000602494 330 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AL356157.2-201ENST00000605122 111 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AL133255.1-201ENST00000606374 441 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 MIR6895-201ENST00000613497 78 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AL590808.1-201ENST00000618696 141 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AL691447.3-201ENST00000635020 330 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 AL450472.1-202ENST00000637286 180 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.63□□□□□ -1.99
HDAC4P56524 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HDAC4P56524 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HDAC4P56524 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC4P56524 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC4P56524 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC4P56524 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC4P56524 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HDAC4P56524 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC4P56524 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 RNU6-784P-201ENST00000384330 106 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 RNU6-331P-201ENST00000384724 107 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 MIR186-201ENST00000384988 86 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 MIR524-201ENST00000385242 87 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 BTF3L4P2-201ENST00000392798 346 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC4P56524 CYCSP48-201ENST00000417124 323 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms