Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH13P55290 AC021146.2-201ENST00000504736 556 ntBASIC2.21□□□□□ -2.06
CDH13P55290 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH13P55290 AC046134.1-201ENST00000514454 666 ntBASIC2.21□□□□□ -2.06
CDH13P55290 RNU6-1088P-201ENST00000516850 104 ntBASIC2.21□□□□□ -2.06
CDH13P55290 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH13P55290 AP005639.2-201ENST00000527592 928 ntBASIC2.21□□□□□ -2.06
CDH13P55290 EIF4A1P12-201ENST00000551910 141 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.21□□□□□ -2.06
CDH13P55290 MIR3162-201ENST00000581818 82 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AC011712.1-201ENST00000588959 234 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AC124303.1-201ENST00000605703 360 ntBASIC2.21□□□□□ -2.06
CDH13P55290 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH13P55290 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH13P55290 RNU5B-2P-201ENST00000363036 113 ntBASIC2.2□□□□□ -2.06
CDH13P55290 U3.9-201ENST00000363823 204 ntBASIC2.2□□□□□ -2.06
CDH13P55290 SNORA3A-201ENST00000364113 130 ntBASIC2.2□□□□□ -2.06
CDH13P55290 SNORA29-201ENST00000384183 140 ntBASIC2.2□□□□□ -2.06
CDH13P55290 MIR517A-201ENST00000385001 87 ntBASIC2.2□□□□□ -2.06
CDH13P55290 MTND3P8-201ENST00000412909 339 ntBASIC2.2□□□□□ -2.06
CDH13P55290 AL139396.1-201ENST00000421137 167 ntBASIC2.2□□□□□ -2.06
CDH13P55290 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH13P55290 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH13P55290 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
CDH13P55290 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
CDH13P55290 MTCO2P30-201ENST00000503662 364 ntBASIC2.2□□□□□ -2.06
CDH13P55290 SNORA4.4-201ENST00000515921 135 ntBASIC2.2□□□□□ -2.06
CDH13P55290 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.2□□□□□ -2.06
CDH13P55290 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH13P55290 RPL17P51-201ENST00000605218 238 ntBASIC2.2□□□□□ -2.06
CDH13P55290 MIR3976-201ENST00000606807 139 ntBASIC2.2□□□□□ -2.06
CDH13P55290 AC019193.3-201ENST00000609144 554 ntBASIC2.2□□□□□ -2.06
CDH13P55290 AL161423.1-201ENST00000613700 262 ntBASIC2.2□□□□□ -2.06
CDH13P55290 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDH13P55290 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH13P55290 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDH13P55290 RNU6-26P-201ENST00000383985 107 ntBASIC2.19□□□□□ -2.06
CDH13P55290 SNORA36A-201ENST00000384221 132 ntBASIC2.19□□□□□ -2.06
CDH13P55290 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDH13P55290 SNORA40.19-201ENST00000390846 128 ntBASIC2.19□□□□□ -2.06
CDH13P55290 SRIP3-201ENST00000413200 219 ntBASIC2.19□□□□□ -2.06
CDH13P55290 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH13P55290 RPS26P42-201ENST00000413485 326 ntBASIC2.19□□□□□ -2.06
CDH13P55290 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH13P55290 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
CDH13P55290 AL513124.1-201ENST00000450410 614 ntBASIC2.19□□□□□ -2.06
CDH13P55290 AL137159.1-201ENST00000452808 512 ntBASIC2.19□□□□□ -2.06
CDH13P55290 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH13P55290 AC005741.1-201ENST00000511094 432 ntBASIC2.19□□□□□ -2.06
CDH13P55290 RNA5SP24-201ENST00000516478 95 ntBASIC2.19□□□□□ -2.06
CDH13P55290 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH13P55290 MIR4742-201ENST00000581069 85 ntBASIC2.19□□□□□ -2.06
CDH13P55290 POLR3GP2-201ENST00000588366 668 ntBASIC2.19□□□□□ -2.06
CDH13P55290 AP000654.2-201ENST00000605633 586 ntBASIC2.19□□□□□ -2.06
CDH13P55290 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDH13P55290 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.19□□□□□ -2.06
CDH13P55290 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.19□□□□□ -2.06
CDH13P55290 CASC19-280ENST00000642102 1351 ntBASIC2.19□□□□□ -2.06
CDH13P55290 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CDH13P55290 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CDH13P55290 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CDH13P55290 Y_RNA.279-201ENST00000364763 95 ntBASIC2.18□□□□□ -2.06
CDH13P55290 RNU6-596P-201ENST00000365395 98 ntBASIC2.18□□□□□ -2.06
CDH13P55290 RNU6-968P-201ENST00000384076 107 ntBASIC2.18□□□□□ -2.06
CDH13P55290 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
CDH13P55290 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH13P55290 EIF4EP2-201ENST00000422816 654 ntBASIC2.18□□□□□ -2.06
CDH13P55290 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH13P55290 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH13P55290 ACA59.1-201ENST00000515966 143 ntBASIC2.18□□□□□ -2.06
CDH13P55290 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH13P55290 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
CDH13P55290 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
CDH13P55290 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH13P55290 AC009994.1-201ENST00000606889 253 ntBASIC2.18□□□□□ -2.06
CDH13P55290 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH13P55290 AL136360.1-201ENST00000503377 1900 ntBASIC2.18□□□□□ -2.06
CDH13P55290 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CDH13P55290 RNU6-767P-201ENST00000384132 107 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RNU6-378P-201ENST00000384324 107 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RN7SKP284-201ENST00000411002 343 ntBASIC2.17□□□□□ -2.06
CDH13P55290 WARS2P1-201ENST00000429678 537 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RBMX2P4-201ENST00000441256 376 ntBASIC2.17□□□□□ -2.06
CDH13P55290 ANXA2P1-201ENST00000505539 926 ntBASIC2.17□□□□□ -2.06
CDH13P55290 PRDX4P1-201ENST00000507189 574 ntBASIC2.17□□□□□ -2.06
CDH13P55290 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RNU6-965P-201ENST00000516721 96 ntBASIC2.17□□□□□ -2.06
CDH13P55290 RNU6-273P-201ENST00000516937 96 ntBASIC2.17□□□□□ -2.06
CDH13P55290 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.17□□□□□ -2.06
CDH13P55290 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH13P55290 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH13P55290 AC026464.5-201ENST00000562497 722 ntBASIC2.17□□□□□ -2.06
CDH13P55290 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.17□□□□□ -2.06
CDH13P55290 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
CDH13P55290 AC137590.2-201ENST00000619709 240 ntBASIC2.17□□□□□ -2.06
CDH13P55290 CTSLP2-204ENST00000629029 392 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms