Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC009161.1-201ENST00000417306 376 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMK1P53667 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.25□□□□□ -2.05
LIMK1P53667 AC078809.1-201ENST00000427601 140 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 SNAP23P1-201ENST00000433229 246 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMK1P53667 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.25□□□□□ -2.05
LIMK1P53667 AMD1P1-201ENST00000457220 922 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 RN7SKP210-201ENST00000459176 261 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 HMGB1P35-201ENST00000503360 598 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC016632.1-201ENST00000503994 196 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC022447.4-201ENST00000504053 364 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMK1P53667 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.25□□□□□ -2.05
LIMK1P53667 Y_RNA.665-201ENST00000516177 98 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 MTND1P5-201ENST00000517906 940 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMK1P53667 AL627230.6-201ENST00000611129 280 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 RMST_3.1-201ENST00000611651 109 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 AC091932.3-201ENST00000624223 323 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LIMK1P53667 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 MTND4P23-201ENST00000447723 1363 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LIMK1P53667 AL359851.1-201ENST00000569460 4997 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC069528.2-201ENST00000624849 1991 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 RNU6-1317P-201ENST00000364582 104 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 Y_RNA.530-201ENST00000384587 101 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 EIF1P1-201ENST00000421436 341 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 UBE2V1P4-201ENST00000425374 344 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 MTND3P9-201ENST00000429526 346 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 PMCHL2-203ENST00000457791 237 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 HMGN2P26-201ENST00000463169 339 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC104564.1-201ENST00000493028 407 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC114801.2-201ENST00000503825 781 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
LIMK1P53667 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.24□□□□□ -2.05
LIMK1P53667 RNU6-965P-201ENST00000516721 96 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.24□□□□□ -2.05
LIMK1P53667 AC026271.5-201ENST00000577873 130 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.24□□□□□ -2.05
LIMK1P53667 AC011494.1-201ENST00000596454 237 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AL031274.2-201ENST00000599419 203 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AP000907.4-201ENST00000604143 237 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC005034.5-201ENST00000604219 466 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AL034555.1-201ENST00000604816 211 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 CTHRC1P1-201ENST00000605383 469 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 AC093913.1-201ENST00000614178 329 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.24□□□□□ -2.05
LIMK1P53667 AC080100.1-201ENST00000624239 5356 ntBASIC2.24□□□□□ -2.05
LIMK1P53667 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LIMK1P53667 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 Y_RNA.100-201ENST00000363141 102 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 Y_RNA.118-201ENST00000363300 101 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 Y_RNA.167-201ENST00000363735 109 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 SNORD32A-201ENST00000364805 84 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 RNU6-534P-201ENST00000364877 106 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 RNU6-142P-201ENST00000384019 107 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LIMK1P53667 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMK1P53667 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.23□□□□□ -2.05
LIMK1P53667 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.23□□□□□ -2.05
LIMK1P53667 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.23□□□□□ -2.05
LIMK1P53667 AC025465.4-201ENST00000513422 638 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 RN7SKP256-201ENST00000517201 314 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMK1P53667 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMK1P53667 AC107953.1-201ENST00000522216 297 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 TRAV32-201ENST00000553993 340 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.23□□□□□ -2.05
LIMK1P53667 MIR3923-201ENST00000579521 83 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AC023043.2-201ENST00000589678 1026 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AC080078.2-201ENST00000603766 501 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
LIMK1P53667 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.23□□□□□ -2.05
LIMK1P53667 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIMK1P53667 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LIMK1P53667 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
LIMK1P53667 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
LIMK1P53667 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
LIMK1P53667 AC092268.1-201ENST00000342691 405 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 RNU6-227P-201ENST00000362865 103 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 RNU6-944P-201ENST00000364023 107 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 RNU6-743P-201ENST00000364151 106 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 RNU6-128P-201ENST00000383976 107 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 SNORA32.2-201ENST00000384049 122 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 MIR521-1-201ENST00000384902 87 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 AP000275.1-201ENST00000411943 390 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 VN1R36P-201ENST00000414936 291 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.22□□□□□ -2.05
LIMK1P53667 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.22□□□□□ -2.05
LIMK1P53667 AC145146.1-201ENST00000496370 254 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 TRBVA-201ENST00000498804 316 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 MRPS17P9-201ENST00000511924 393 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms