Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COPAP53621 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.95□□□□□ -1.94
COPAP53621 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COPAP53621 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
COPAP53621 AC233981.2-201ENST00000611524 1614 ntBASIC2.94□□□□□ -1.94
COPAP53621 Y_RNA.31-201ENST00000362574 102 ntBASIC2.94□□□□□ -1.94
COPAP53621 RNU6-1285P-201ENST00000363480 105 ntBASIC2.94□□□□□ -1.94
COPAP53621 RNU6-595P-201ENST00000363944 107 ntBASIC2.94□□□□□ -1.94
COPAP53621 Y_RNA.252-201ENST00000364556 101 ntBASIC2.94□□□□□ -1.94
COPAP53621 RNU6-700P-201ENST00000391043 107 ntBASIC2.94□□□□□ -1.94
COPAP53621 AC078809.1-201ENST00000427601 140 ntBASIC2.94□□□□□ -1.94
COPAP53621 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.94□□□□□ -1.94
COPAP53621 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.94□□□□□ -1.94
COPAP53621 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.94□□□□□ -1.94
COPAP53621 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.94□□□□□ -1.94
COPAP53621 AC023442.1-201ENST00000531247 422 ntBASIC2.94□□□□□ -1.94
COPAP53621 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
COPAP53621 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.94□□□□□ -1.94
COPAP53621 AL159153.1-201ENST00000619688 317 ntBASIC2.94□□□□□ -1.94
COPAP53621 MIR6733-201ENST00000635723 61 ntBASIC2.94□□□□□ -1.94
COPAP53621 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COPAP53621 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.94□□□□□ -1.94
COPAP53621 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COPAP53621 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
COPAP53621 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
COPAP53621 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.93□□□□□ -1.94
COPAP53621 AC092268.1-201ENST00000342691 405 ntBASIC2.93□□□□□ -1.94
COPAP53621 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
COPAP53621 Y_RNA.40-201ENST00000362645 93 ntBASIC2.93□□□□□ -1.94
COPAP53621 RNU6-655P-201ENST00000362858 107 ntBASIC2.93□□□□□ -1.94
COPAP53621 RNU6-99P-201ENST00000364721 107 ntBASIC2.93□□□□□ -1.94
COPAP53621 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
COPAP53621 Y_RNA.577-201ENST00000384794 101 ntBASIC2.93□□□□□ -1.94
COPAP53621 MIR218-1-201ENST00000384999 110 ntBASIC2.93□□□□□ -1.94
COPAP53621 AL590004.2-201ENST00000404787 371 ntBASIC2.93□□□□□ -1.94
COPAP53621 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
COPAP53621 AL590135.1-201ENST00000422215 156 ntBASIC2.93□□□□□ -1.94
COPAP53621 PMCHL1-202ENST00000423102 261 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC019205.3-201ENST00000424573 156 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC016700.2-201ENST00000446011 156 ntBASIC2.93□□□□□ -1.94
COPAP53621 AL118496.2-201ENST00000448300 230 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC108938.1-201ENST00000451204 136 ntBASIC2.93□□□□□ -1.94
COPAP53621 GSTA11P-201ENST00000452866 669 ntBASIC2.93□□□□□ -1.94
COPAP53621 RN7SKP210-201ENST00000459176 261 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC015911.1-201ENST00000495111 156 ntBASIC2.93□□□□□ -1.94
COPAP53621 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.93□□□□□ -1.94
COPAP53621 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.93□□□□□ -1.94
COPAP53621 SCARNA15.1-201ENST00000516384 125 ntBASIC2.93□□□□□ -1.94
COPAP53621 RN7SKP295-201ENST00000517264 153 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.93□□□□□ -1.94
COPAP53621 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.93□□□□□ -1.94
COPAP53621 AL590705.4-201ENST00000532209 134 ntBASIC2.93□□□□□ -1.94
COPAP53621 MRPS36P4-201ENST00000534436 298 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC079600.2-201ENST00000550076 130 ntBASIC2.93□□□□□ -1.94
COPAP53621 MIR4319-201ENST00000577285 85 ntBASIC2.93□□□□□ -1.94
COPAP53621 MIR3199-1-201ENST00000582434 88 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.93□□□□□ -1.94
COPAP53621 AC060766.3-201ENST00000591442 263 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC083806.3-201ENST00000614016 455 ntBASIC2.93□□□□□ -1.94
COPAP53621 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COPAP53621 AP000560.1-201ENST00000624150 1937 ntBASIC2.93□□□□□ -1.94
COPAP53621 AC062016.1-201ENST00000355719 319 ntBASIC2.92□□□□□ -1.94
COPAP53621 Y_RNA.216-201ENST00000364205 93 ntBASIC2.92□□□□□ -1.94
COPAP53621 RNU6-1286P-201ENST00000383871 107 ntBASIC2.92□□□□□ -1.94
COPAP53621 SNORA22B-201ENST00000383876 138 ntBASIC2.92□□□□□ -1.94
COPAP53621 CYCSP48-201ENST00000417124 323 ntBASIC2.92□□□□□ -1.94
COPAP53621 AC007098.1-201ENST00000420122 367 ntBASIC2.92□□□□□ -1.94
COPAP53621 AC018865.2-201ENST00000423631 129 ntBASIC2.92□□□□□ -1.94
COPAP53621 AC008267.5-201ENST00000424928 265 ntBASIC2.92□□□□□ -1.94
COPAP53621 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
COPAP53621 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
COPAP53621 AL353705.4-201ENST00000449661 238 ntBASIC2.92□□□□□ -1.94
COPAP53621 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.92□□□□□ -1.94
COPAP53621 RPL30P10-201ENST00000488148 337 ntBASIC2.92□□□□□ -1.94
COPAP53621 RNU2-53P-201ENST00000516257 147 ntBASIC2.92□□□□□ -1.94
COPAP53621 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.92□□□□□ -1.94
COPAP53621 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.92□□□□□ -1.94
COPAP53621 AC016925.2-201ENST00000605108 242 ntBASIC2.92□□□□□ -1.94
COPAP53621 SNORA43.4-201ENST00000629559 138 ntBASIC2.92□□□□□ -1.94
COPAP53621 MIR7157-201ENST00000635801 60 ntBASIC2.92□□□□□ -1.94
COPAP53621 SNORD98-201ENST00000636377 67 ntBASIC2.92□□□□□ -1.94
COPAP53621 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.91□□□□□ -1.94
COPAP53621 RNU6-1210P-201ENST00000363775 107 ntBASIC2.91□□□□□ -1.94
COPAP53621 RNU4-9P-201ENST00000364951 139 ntBASIC2.91□□□□□ -1.94
COPAP53621 Y_RNA.314-201ENST00000365114 102 ntBASIC2.91□□□□□ -1.94
COPAP53621 Y_RNA.422-201ENST00000384054 114 ntBASIC2.91□□□□□ -1.94
COPAP53621 MIR625-201ENST00000385047 85 ntBASIC2.91□□□□□ -1.94
COPAP53621 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
COPAP53621 MTCYBP10-201ENST00000424905 650 ntBASIC2.91□□□□□ -1.94
COPAP53621 EIF4EP4-201ENST00000424916 578 ntBASIC2.91□□□□□ -1.94
COPAP53621 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COPAP53621 AC087499.2-201ENST00000432861 149 ntBASIC2.91□□□□□ -1.94
COPAP53621 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.91□□□□□ -1.94
COPAP53621 snoU13.14-201ENST00000459372 104 ntBASIC2.91□□□□□ -1.94
COPAP53621 RPL30P1-201ENST00000488676 339 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.91□□□□□ -1.94
COPAP53621 RNU7-4P-201ENST00000516961 62 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC016256.1-201ENST00000547971 354 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms