Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RNA5SP337-201ENST00000517007 109 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.53□□□□□ -2.32
NKX2-5P52952 HSPE1P4-201ENST00000550617 308 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.53□□□□□ -2.32
NKX2-5P52952 TMF1P1-201ENST00000576058 373 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 VN1R107P-201ENST00000601784 209 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 AL513534.2-201ENST00000603836 250 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
NKX2-5P52952 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
NKX2-5P52952 BX322639.1-202ENST00000423987 2213 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 U3.4-201ENST00000363352 213 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 SNORD114-27-201ENST00000363766 70 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 SNORA24.1-201ENST00000384401 135 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 RNU6-692P-201ENST00000384496 107 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 MIR520E-201ENST00000384867 87 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 RNU11-5P-201ENST00000391216 129 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 RNU2-3P-201ENST00000410144 191 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 AC073614.1-201ENST00000438690 650 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 AC245047.7-201ENST00000440265 293 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.52□□□□□ -2.33
NKX2-5P52952 Z73417.1-201ENST00000447373 778 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX2-5P52952 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX2-5P52952 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.52□□□□□ -2.33
NKX2-5P52952 AC117522.1-201ENST00000509821 380 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 RNU6-567P-201ENST00000516746 107 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.52□□□□□ -2.33
NKX2-5P52952 MIR3973-201ENST00000579824 107 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 MIR4742-201ENST00000581069 85 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 AL359821.1-201ENST00000605519 182 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 AC021506.2-201ENST00000612354 169 ntBASIC0.52□□□□□ -2.33
NKX2-5P52952 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
NKX2-5P52952 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NKX2-5P52952 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
NKX2-5P52952 RNU6-392P-201ENST00000364926 101 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 RNU6-418P-201ENST00000384035 107 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 RNU6-378P-201ENST00000384324 107 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 SNORA26.3-201ENST00000391119 136 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 Y_RNA.595-201ENST00000410403 105 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.51□□□□□ -2.33
NKX2-5P52952 AC002486.1-201ENST00000435098 391 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.51□□□□□ -2.33
NKX2-5P52952 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.51□□□□□ -2.33
NKX2-5P52952 MTND1P18-201ENST00000448191 573 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.51□□□□□ -2.33
NKX2-5P52952 RBBP4P6-201ENST00000508098 202 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC108729.3-201ENST00000513484 108 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 RN7SKP265-201ENST00000516448 223 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC109479.2-201ENST00000517842 174 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.51□□□□□ -2.33
NKX2-5P52952 AC092451.2-201ENST00000538746 658 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC090517.1-201ENST00000569307 266 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.51□□□□□ -2.33
NKX2-5P52952 AC008521.1-201ENST00000587471 187 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.51□□□□□ -2.33
NKX2-5P52952 MTND3P19-201ENST00000603825 345 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC080013.3-201ENST00000606839 578 ntBASIC0.51□□□□□ -2.33
NKX2-5P52952 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.51□□□□□ -2.33
NKX2-5P52952 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
NKX2-5P52952 SNORA18.2-201ENST00000383865 132 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 RNU6-1080P-201ENST00000383982 107 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 MIR300-201ENST00000401138 83 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 RNU2-39P-201ENST00000410604 198 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.5□□□□□ -2.33
NKX2-5P52952 RPL23AP95-201ENST00000426806 265 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 USP9YP28-201ENST00000435142 589 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
NKX2-5P52952 C1DP4-201ENST00000455429 424 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 BET1P1-201ENST00000482276 359 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX2-5P52952 RNA5SP255-201ENST00000516370 107 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.5□□□□□ -2.33
NKX2-5P52952 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX2-5P52952 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.5□□□□□ -2.33
NKX2-5P52952 CYP4A27P-201ENST00000567218 190 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AP001004.1-201ENST00000582468 324 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX2-5P52952 AC073539.2-201ENST00000597113 165 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AC078795.3-201ENST00000602913 472 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AL929325.1-201ENST00000603096 117 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 AC108706.1-201ENST00000611053 297 ntBASIC0.5□□□□□ -2.33
NKX2-5P52952 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
NKX2-5P52952 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.49□□□□□ -2.33
NKX2-5P52952 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 RPL21P1-201ENST00000399532 476 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 RNU6-387P-201ENST00000411331 105 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 CYCSP33-201ENST00000414485 327 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.49□□□□□ -2.33
NKX2-5P52952 MTCO2P29-201ENST00000465212 189 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 AC092991.1-201ENST00000477176 376 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 RPS27P22-201ENST00000478056 241 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 AC016632.1-201ENST00000503994 196 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 AC105758.1-201ENST00000506038 399 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 AC116347.2-201ENST00000514912 523 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 RNU6-1146P-201ENST00000516282 102 ntBASIC0.49□□□□□ -2.33
NKX2-5P52952 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms