Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNU5E-6P-201ENST00000365574 115 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 RNU6-877P-201ENST00000383868 107 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 RNU6-1031P-201ENST00000384773 107 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 RNA5SP109-201ENST00000391010 116 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.11□□□□□ -2.39
POLR2JP52435 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.11□□□□□ -2.39
POLR2JP52435 AL355994.1-201ENST00000424379 260 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AC010154.1-201ENST00000425857 269 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 UBE2D3P3-201ENST00000426992 425 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.11□□□□□ -2.39
POLR2JP52435 AL606662.1-201ENST00000445763 553 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AL049830.1-201ENST00000468034 425 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 RNA5SP220-201ENST00000516298 104 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 SNORA31.10-201ENST00000516482 106 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.11□□□□□ -2.39
POLR2JP52435 Z83818.1-201ENST00000603584 150 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AP002802.2-201ENST00000605877 235 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AC092354.1-201ENST00000606057 376 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AL360219.1-201ENST00000610230 366 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 U6.42-201ENST00000618440 107 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AC106754.2-201ENST00000623006 233 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 AC097372.5-201ENST00000623665 376 ntBASIC0.11□□□□□ -2.39
POLR2JP52435 CASC19-280ENST00000642102 1351 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 SNORA72.2-201ENST00000365028 127 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 MIR578-201ENST00000384828 96 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
POLR2JP52435 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AL031779.1-201ENST00000415663 330 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 HIGD1AP15-201ENST00000416198 280 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AL606517.2-201ENST00000442855 241 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.1□□□□□ -2.39
POLR2JP52435 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
POLR2JP52435 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.1□□□□□ -2.39
POLR2JP52435 SNRPGP9-201ENST00000456025 225 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 RNU7-90P-201ENST00000459216 62 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AC007547.1-201ENST00000462177 490 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.1□□□□□ -2.39
POLR2JP52435 AC022493.2-201ENST00000506122 481 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AC113347.3-201ENST00000509113 148 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
POLR2JP52435 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.1□□□□□ -2.39
POLR2JP52435 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.1□□□□□ -2.39
POLR2JP52435 AC008752.3-201ENST00000588113 712 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 DEFB131E-202ENST00000602581 683 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 AL390123.1-201ENST00000603216 237 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 PRELID3BP2-201ENST00000605362 201 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 Z69720.2-201ENST00000624755 279 ntBASIC0.1□□□□□ -2.39
POLR2JP52435 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
POLR2JP52435 SNORD116-13-201ENST00000384408 92 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AL353718.1-201ENST00000451028 517 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 RPS20P10-201ENST00000451209 253 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.09□□□□□ -2.4
POLR2JP52435 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.09□□□□□ -2.4
POLR2JP52435 AP000797.1-201ENST00000478870 387 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AL163973.1-201ENST00000484753 577 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 RNU1-86P-201ENST00000516108 154 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 RNU1-107P-201ENST00000516617 154 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AC087854.1-201ENST00000519706 414 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AC087883.1-201ENST00000551882 391 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 MIR548AC-201ENST00000585049 88 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AC064872.1-201ENST00000604823 1072 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AC026585.1-201ENST00000619582 524 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 AC103706.2-201ENST00000638080 240 ntBASIC0.09□□□□□ -2.4
POLR2JP52435 MTND4P5-201ENST00000435821 1374 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU1-76P-201ENST00000362903 159 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-960P-201ENST00000364056 120 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-609P-201ENST00000365459 107 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-1179P-201ENST00000384667 107 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 MIR653-201ENST00000385279 96 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 SNORA12.1-201ENST00000390873 148 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 RPL23AP30-201ENST00000432419 501 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-1132P-201ENST00000459214 107 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AL049829.1-201ENST00000465411 156 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 RNU6-947P-201ENST00000516264 106 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 RNU5F-4P-201ENST00000516581 114 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.08□□□□□ -2.4
POLR2JP52435 MIR3124-201ENST00000582636 67 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AL606834.3-201ENST00000602615 496 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 Z98751.3-201ENST00000604447 521 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AC092574.1-201ENST00000609771 420 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.08□□□□□ -2.4
POLR2JP52435 AL603839.4-201ENST00000624658 1005 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.08□□□□□ -2.4
POLR2JP52435 AC006927.4-201ENST00000639187 543 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 AC027514.1-201ENST00000588561 1603 ntBASIC0.08□□□□□ -2.4
POLR2JP52435 BX322639.1-202ENST00000423987 2213 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.07□□□□□ -2.4
POLR2JP52435 RNU5B-4P-201ENST00000363508 111 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 RNY3P13-201ENST00000365542 102 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.07□□□□□ -2.4
POLR2JP52435 RNY1P8-201ENST00000383970 114 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 RNU6-418P-201ENST00000384035 107 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms