Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-378P-201ENST00000384324 107 ntBASIC2.82□□□□□ -1.96
NEK3P51956 Y_RNA.594-201ENST00000410373 140 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AC093019.1-201ENST00000443135 252 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AF186996.7-201ENST00000492781 209 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.82□□□□□ -1.96
NEK3P51956 FGF7P4-201ENST00000509595 295 ntBASIC2.82□□□□□ -1.96
NEK3P51956 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.82□□□□□ -1.96
NEK3P51956 RNU6-875P-201ENST00000516488 106 ntBASIC2.82□□□□□ -1.96
NEK3P51956 RNU1-104P-201ENST00000517280 175 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AC026271.5-201ENST00000577873 130 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.82□□□□□ -1.96
NEK3P51956 SNRPGP17-201ENST00000603780 214 ntBASIC2.82□□□□□ -1.96
NEK3P51956 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
NEK3P51956 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.82□□□□□ -1.96
NEK3P51956 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.82□□□□□ -1.96
NEK3P51956 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NEK3P51956 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
NEK3P51956 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
NEK3P51956 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NEK3P51956 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NEK3P51956 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NEK3P51956 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
NEK3P51956 Y_RNA.263-201ENST00000364659 114 ntBASIC2.81□□□□□ -1.96
NEK3P51956 RNU6-842P-201ENST00000384269 107 ntBASIC2.81□□□□□ -1.96
NEK3P51956 RNU6-1093P-201ENST00000391194 107 ntBASIC2.81□□□□□ -1.96
NEK3P51956 RNU2-48P-201ENST00000410694 191 ntBASIC2.81□□□□□ -1.96
NEK3P51956 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
NEK3P51956 AP000705.1-201ENST00000454567 350 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AL139109.1-201ENST00000455491 297 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AC007215.1-201ENST00000464893 276 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
NEK3P51956 RNU6-667P-201ENST00000517186 102 ntBASIC2.81□□□□□ -1.96
NEK3P51956 HSPE1P18-201ENST00000517602 280 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.81□□□□□ -1.96
NEK3P51956 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.81□□□□□ -1.96
NEK3P51956 AC079600.2-201ENST00000550076 130 ntBASIC2.81□□□□□ -1.96
NEK3P51956 MIR4319-201ENST00000577285 85 ntBASIC2.81□□□□□ -1.96
NEK3P51956 MIR3126-201ENST00000577443 74 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AC006023.1-201ENST00000603944 259 ntBASIC2.81□□□□□ -1.96
NEK3P51956 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.81□□□□□ -1.96
NEK3P51956 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NEK3P51956 RNU6-595P-201ENST00000363944 107 ntBASIC2.8□□□□□ -1.96
NEK3P51956 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
NEK3P51956 Y_RNA.474-201ENST00000384341 102 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
NEK3P51956 MIR320B2-201ENST00000408479 138 ntBASIC2.8□□□□□ -1.96
NEK3P51956 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
NEK3P51956 SRIP3-201ENST00000413200 219 ntBASIC2.8□□□□□ -1.96
NEK3P51956 USMG5P1-201ENST00000425964 177 ntBASIC2.8□□□□□ -1.96
NEK3P51956 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.8□□□□□ -1.96
NEK3P51956 snoU13.30-201ENST00000458951 104 ntBASIC2.8□□□□□ -1.96
NEK3P51956 UBE2DNL-203ENST00000474922 222 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AC068781.1-201ENST00000488231 618 ntBASIC2.8□□□□□ -1.96
NEK3P51956 RNA5SP137-201ENST00000516833 135 ntBASIC2.8□□□□□ -1.96
NEK3P51956 RNA5SP54-201ENST00000516951 92 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AC104260.1-201ENST00000616660 539 ntBASIC2.8□□□□□ -1.96
NEK3P51956 AL359697.1-201ENST00000624879 587 ntBASIC2.8□□□□□ -1.96
NEK3P51956 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.8□□□□□ -1.96
NEK3P51956 Y_RNA.70-201ENST00000362886 110 ntBASIC2.79□□□□□ -1.96
NEK3P51956 SNORD115-8-201ENST00000363856 82 ntBASIC2.79□□□□□ -1.96
NEK3P51956 SNORD115-38-201ENST00000365037 82 ntBASIC2.79□□□□□ -1.96
NEK3P51956 RNU6-234P-201ENST00000365229 104 ntBASIC2.79□□□□□ -1.96
NEK3P51956 Y_RNA.500-201ENST00000384466 111 ntBASIC2.79□□□□□ -1.96
NEK3P51956 SNORA40.19-201ENST00000390846 128 ntBASIC2.79□□□□□ -1.96
NEK3P51956 AL357139.1-201ENST00000407792 426 ntBASIC2.79□□□□□ -1.96
NEK3P51956 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NEK3P51956 AC063976.3-201ENST00000426849 329 ntBASIC2.79□□□□□ -1.96
NEK3P51956 RPL30P10-201ENST00000488148 337 ntBASIC2.79□□□□□ -1.96
NEK3P51956 Y_RNA.670-201ENST00000516255 105 ntBASIC2.79□□□□□ -1.96
NEK3P51956 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
NEK3P51956 AL590705.4-201ENST00000532209 134 ntBASIC2.79□□□□□ -1.96
NEK3P51956 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
NEK3P51956 MIR5690-201ENST00000583739 73 ntBASIC2.79□□□□□ -1.96
NEK3P51956 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.79□□□□□ -1.96
NEK3P51956 RPL12P50-201ENST00000603116 116 ntBASIC2.79□□□□□ -1.96
NEK3P51956 AC016727.1-205ENST00000605437 569 ntBASIC2.79□□□□□ -1.96
NEK3P51956 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NEK3P51956 KPNA2P1-201ENST00000458289 1591 ntBASIC2.78□□□□□ -1.96
NEK3P51956 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.78□□□□□ -1.96
NEK3P51956 AP006437.1-201ENST00000641440 3685 ntBASIC2.78□□□□□ -1.96
NEK3P51956 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NEK3P51956 AC062016.1-201ENST00000355719 319 ntBASIC2.78□□□□□ -1.96
NEK3P51956 RNU6-1059P-201ENST00000363752 98 ntBASIC2.78□□□□□ -1.96
NEK3P51956 Y_RNA.387-201ENST00000383918 102 ntBASIC2.78□□□□□ -1.96
NEK3P51956 MIR592-201ENST00000384959 97 ntBASIC2.78□□□□□ -1.96
NEK3P51956 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
NEK3P51956 MIR153-2-201ENST00000385225 87 ntBASIC2.78□□□□□ -1.96
NEK3P51956 SNORA12-201ENST00000391162 147 ntBASIC2.78□□□□□ -1.96
NEK3P51956 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
NEK3P51956 EDDM3CP-201ENST00000415977 425 ntBASIC2.78□□□□□ -1.96
NEK3P51956 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.78□□□□□ -1.96
NEK3P51956 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
NEK3P51956 AC245102.2-201ENST00000448956 180 ntBASIC2.78□□□□□ -1.96
NEK3P51956 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.78□□□□□ -1.96
NEK3P51956 snoU13.6-201ENST00000458785 104 ntBASIC2.78□□□□□ -1.96
NEK3P51956 FO393415.2-201ENST00000480085 343 ntBASIC2.78□□□□□ -1.96
NEK3P51956 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms