Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASP4P49662 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASP4P49662 Y_RNA.77-201ENST00000362962 107 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNA5SP493-201ENST00000364115 91 ntBASIC1.58□□□□□ -2.16
CASP4P49662 Y_RNA.332-201ENST00000365271 113 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNU6-996P-201ENST00000365438 107 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNU6-1106P-201ENST00000390845 107 ntBASIC1.58□□□□□ -2.16
CASP4P49662 MTCYBP8-201ENST00000422855 651 ntBASIC1.58□□□□□ -2.16
CASP4P49662 VN1R108P-201ENST00000431580 830 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC002486.1-201ENST00000435098 391 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC073415.1-201ENST00000449240 153 ntBASIC1.58□□□□□ -2.16
CASP4P49662 HMGN2P18-201ENST00000450680 270 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNU1-131P-201ENST00000458943 161 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNU7-180P-201ENST00000459240 63 ntBASIC1.58□□□□□ -2.16
CASP4P49662 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.58□□□□□ -2.16
CASP4P49662 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.58□□□□□ -2.16
CASP4P49662 HMGB1P29-201ENST00000505659 499 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RN7SKP298-201ENST00000515950 94 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.58□□□□□ -2.16
CASP4P49662 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC026407.1-201ENST00000518369 204 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC087441.2-201ENST00000529141 262 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.58□□□□□ -2.16
CASP4P49662 AC103996.1-201ENST00000555468 102 ntBASIC1.58□□□□□ -2.16
CASP4P49662 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AC004223.2-201ENST00000590309 544 ntBASIC1.58□□□□□ -2.16
CASP4P49662 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
CASP4P49662 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CASP4P49662 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CASP4P49662 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASP4P49662 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASP4P49662 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
CASP4P49662 U3.9-201ENST00000363823 204 ntBASIC1.57□□□□□ -2.16
CASP4P49662 Y_RNA.553-201ENST00000384670 102 ntBASIC1.57□□□□□ -2.16
CASP4P49662 SNORA12-201ENST00000391162 147 ntBASIC1.57□□□□□ -2.16
CASP4P49662 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
CASP4P49662 MTCO2P19-201ENST00000427513 598 ntBASIC1.57□□□□□ -2.16
CASP4P49662 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.57□□□□□ -2.16
CASP4P49662 AC098826.2-201ENST00000452011 651 ntBASIC1.57□□□□□ -2.16
CASP4P49662 RPL31P3-201ENST00000458430 332 ntBASIC1.57□□□□□ -2.16
CASP4P49662 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.57□□□□□ -2.16
CASP4P49662 MIR449C-201ENST00000516047 92 ntBASIC1.57□□□□□ -2.16
CASP4P49662 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
CASP4P49662 Y_RNA.675-201ENST00000516389 149 ntBASIC1.57□□□□□ -2.16
CASP4P49662 SNORA31.16-201ENST00000516773 139 ntBASIC1.57□□□□□ -2.16
CASP4P49662 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
CASP4P49662 AC021231.3-201ENST00000558497 370 ntBASIC1.57□□□□□ -2.16
CASP4P49662 MIR5583-1-201ENST00000580941 59 ntBASIC1.57□□□□□ -2.16
CASP4P49662 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
CASP4P49662 uc_338.34-201ENST00000617467 174 ntBASIC1.57□□□□□ -2.16
CASP4P49662 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CASP4P49662 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
CASP4P49662 Y_RNA.296-201ENST00000364930 108 ntBASIC1.56□□□□□ -2.16
CASP4P49662 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC068050.1-201ENST00000394891 380 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AF228730.1-201ENST00000397972 663 ntBASIC1.56□□□□□ -2.16
CASP4P49662 MTCO3P41-201ENST00000414801 328 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC123900.1-201ENST00000420390 96 ntBASIC1.56□□□□□ -2.16
CASP4P49662 NCOR1P3-201ENST00000420479 303 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.56□□□□□ -2.16
CASP4P49662 AC108667.1-201ENST00000428618 249 ntBASIC1.56□□□□□ -2.16
CASP4P49662 MTND1P26-201ENST00000440488 538 ntBASIC1.56□□□□□ -2.16
CASP4P49662 RPS3AP17-201ENST00000472594 777 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AL163973.1-201ENST00000484753 577 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.56□□□□□ -2.16
CASP4P49662 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.56□□□□□ -2.16
CASP4P49662 MTND4P7-201ENST00000523876 130 ntBASIC1.56□□□□□ -2.16
CASP4P49662 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.56□□□□□ -2.16
CASP4P49662 AC090115.3-201ENST00000553218 849 ntBASIC1.56□□□□□ -2.16
CASP4P49662 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
CASP4P49662 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.56□□□□□ -2.16
CASP4P49662 AC109446.1-201ENST00000566172 220 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.56□□□□□ -2.16
CASP4P49662 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.56□□□□□ -2.16
CASP4P49662 AC012507.3-201ENST00000603556 477 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
CASP4P49662 RPL17P51-201ENST00000605218 238 ntBASIC1.56□□□□□ -2.16
CASP4P49662 RNU6-85P-201ENST00000605989 107 ntBASIC1.56□□□□□ -2.16
CASP4P49662 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
CASP4P49662 RNU6-438P-201ENST00000365561 103 ntBASIC1.55□□□□□ -2.16
CASP4P49662 RNA5SP201-201ENST00000410316 124 ntBASIC1.55□□□□□ -2.16
CASP4P49662 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
CASP4P49662 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.55□□□□□ -2.16
CASP4P49662 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.55□□□□□ -2.16
CASP4P49662 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.55□□□□□ -2.16
CASP4P49662 MTCO2P18-201ENST00000457151 658 ntBASIC1.55□□□□□ -2.16
CASP4P49662 AC010424.1-201ENST00000506336 297 ntBASIC1.55□□□□□ -2.16
CASP4P49662 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
CASP4P49662 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.55□□□□□ -2.16
CASP4P49662 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.55□□□□□ -2.16
CASP4P49662 DNAJC19P9-201ENST00000555084 351 ntBASIC1.55□□□□□ -2.16
CASP4P49662 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.55□□□□□ -2.16
CASP4P49662 AP001836.1-201ENST00000604675 523 ntBASIC1.55□□□□□ -2.16
CASP4P49662 AL136221.1-201ENST00000621449 509 ntBASIC1.55□□□□□ -2.16
CASP4P49662 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
CASP4P49662 Y_RNA.1-201ENST00000352915 104 ntBASIC1.54□□□□□ -2.16
CASP4P49662 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
CASP4P49662 RNU6-1158P-201ENST00000391167 107 ntBASIC1.54□□□□□ -2.16
CASP4P49662 AL606923.1-201ENST00000406616 190 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms