Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL591034.1-201ENST00000407447 340 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 AL158823.1-201ENST00000418441 478 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.22□□□□□ -1.57
PRIM1P49642 Y_RNA.692-201ENST00000516627 105 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.22□□□□□ -1.57
PRIM1P49642 AC011602.1-201ENST00000546484 331 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 YPEL5P3-201ENST00000547227 352 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.22□□□□□ -1.57
PRIM1P49642 EIF4A1P12-201ENST00000551910 141 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.22□□□□□ -1.57
PRIM1P49642 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.22□□□□□ -1.57
PRIM1P49642 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PRIM1P49642 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PRIM1P49642 AC004944.1-201ENST00000517807 3059 ntBASIC5.22□□□□□ -1.57
PRIM1P49642 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRIM1P49642 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 AC073346.2-201ENST00000624724 2058 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 MIR549A-201ENST00000385268 96 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 SNORA3.3-201ENST00000408712 125 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 AC069285.2-201ENST00000440210 275 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 MIR3922-201ENST00000585192 84 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.21□□□□□ -1.58
PRIM1P49642 AL138721.1-201ENST00000616756 179 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 LINC00901.1-201ENST00000617252 152 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 BMS1P21-201ENST00000634565 365 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 MIR3199-2-201ENST00000636243 86 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 U6.105-201ENST00000637379 88 ntBASIC5.21□□□□□ -1.58
PRIM1P49642 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.21□□□□□ -1.58
PRIM1P49642 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.21□□□□□ -1.58
PRIM1P49642 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRIM1P49642 ZNF702P-202ENST00000434269 1966 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PRIM1P49642 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRIM1P49642 RNU6-50P-201ENST00000362356 103 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 RNU6-147P-201ENST00000383983 107 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 AL441985.1-201ENST00000457727 251 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 PPIAP15-201ENST00000479662 484 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 RPL29P14-201ENST00000495837 428 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 RNU5F-2P-201ENST00000516066 82 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 SCARNA14-201ENST00000516903 136 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.2□□□□□ -1.58
PRIM1P49642 PCGEM1.1-201ENST00000613431 131 ntBASIC5.2□□□□□ -1.58
PRIM1P49642 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.2□□□□□ -1.58
PRIM1P49642 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRIM1P49642 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRIM1P49642 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PRIM1P49642 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PRIM1P49642 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PRIM1P49642 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PRIM1P49642 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.19□□□□□ -1.58
PRIM1P49642 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.19□□□□□ -1.58
PRIM1P49642 AC068700.1-201ENST00000565862 3754 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 SNORD35B-201ENST00000363660 87 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 MT-TT-201ENST00000387460 66 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 RNA5SP39-201ENST00000411245 120 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.19□□□□□ -1.58
PRIM1P49642 AC107626.1-201ENST00000471084 183 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.19□□□□□ -1.58
PRIM1P49642 RNU7-143P-201ENST00000516781 65 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 RNA5SP468-201ENST00000516782 93 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 IGKV2D-19-201ENST00000523346 262 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 NDUFA5P6-201ENST00000542110 379 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 AL670379.3-201ENST00000605040 251 ntBASIC5.19□□□□□ -1.58
PRIM1P49642 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.19□□□□□ -1.58
PRIM1P49642 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRIM1P49642 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.18□□□□□ -1.58
PRIM1P49642 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRIM1P49642 AC007656.2-201ENST00000624902 4547 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.18□□□□□ -1.58
PRIM1P49642 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRIM1P49642 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.18□□□□□ -1.58
PRIM1P49642 RNU1-15P-201ENST00000353977 144 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 SNORA48.5-201ENST00000391143 135 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 RNA5SP201-201ENST00000410316 124 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC004552.1-201ENST00000419089 348 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.18□□□□□ -1.58
PRIM1P49642 AC063976.4-201ENST00000421971 163 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AL353748.1-201ENST00000440753 474 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 HMGN2P21-201ENST00000447764 270 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 NDUFS5P3-201ENST00000450668 321 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 RPS26P3-201ENST00000470205 348 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC090543.2-201ENST00000483963 348 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC004057.1-201ENST00000485827 348 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.18□□□□□ -1.58
PRIM1P49642 CYP4A43P-201ENST00000568156 121 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.18□□□□□ -1.58
PRIM1P49642 RPL17P51-201ENST00000605218 238 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 MIR432-201ENST00000606207 94 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 AC025754.2-201ENST00000606491 432 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 U6.115-201ENST00000636045 103 ntBASIC5.18□□□□□ -1.58
PRIM1P49642 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.18□□□□□ -1.58
PRIM1P49642 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRIM1P49642 Z82217.1-201ENST00000625157 8149 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms