Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
CDX1P47902 AC025754.2-201ENST00000606491 432 ntBASIC2.01□□□□□ -2.09
CDX1P47902 AC019193.3-201ENST00000609144 554 ntBASIC2.01□□□□□ -2.09
CDX1P47902 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX1P47902 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
CDX1P47902 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX1P47902 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2□□□□□ -2.09
CDX1P47902 MIR449A-201ENST00000362113 91 ntBASIC2□□□□□ -2.09
CDX1P47902 RNU6-1159P-201ENST00000362933 107 ntBASIC2□□□□□ -2.09
CDX1P47902 Y_RNA.86-201ENST00000363020 111 ntBASIC2□□□□□ -2.09
CDX1P47902 RNU6-1286P-201ENST00000383871 107 ntBASIC2□□□□□ -2.09
CDX1P47902 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
CDX1P47902 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2□□□□□ -2.09
CDX1P47902 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
CDX1P47902 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2□□□□□ -2.09
CDX1P47902 snoU13.6-201ENST00000458785 104 ntBASIC2□□□□□ -2.09
CDX1P47902 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
CDX1P47902 RPL23AP94-201ENST00000512518 302 ntBASIC2□□□□□ -2.09
CDX1P47902 RNU6-864P-201ENST00000516256 108 ntBASIC2□□□□□ -2.09
CDX1P47902 RNA5SP490-201ENST00000517141 136 ntBASIC2□□□□□ -2.09
CDX1P47902 AF235103.2-201ENST00000525753 346 ntBASIC2□□□□□ -2.09
CDX1P47902 AC243972.3-201ENST00000539655 198 ntBASIC2□□□□□ -2.09
CDX1P47902 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2□□□□□ -2.09
CDX1P47902 AP002770.2-201ENST00000543613 532 ntBASIC2□□□□□ -2.09
CDX1P47902 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2□□□□□ -2.09
CDX1P47902 AC078899.2-201ENST00000595282 212 ntBASIC2□□□□□ -2.09
CDX1P47902 AC122108.2-201ENST00000611946 526 ntBASIC2□□□□□ -2.09
CDX1P47902 AC092794.1-201ENST00000612734 582 ntBASIC2□□□□□ -2.09
CDX1P47902 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2□□□□□ -2.09
CDX1P47902 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2□□□□□ -2.09
CDX1P47902 AC006504.8-201ENST00000621046 635 ntBASIC2□□□□□ -2.09
CDX1P47902 U4.3-201ENST00000621047 82 ntBASIC2□□□□□ -2.09
CDX1P47902 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDX1P47902 AC233981.2-201ENST00000611524 1614 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
CDX1P47902 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNU6-234P-201ENST00000365229 104 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
CDX1P47902 SNORD14D-201ENST00000384390 87 ntBASIC1.99□□□□□ -2.09
CDX1P47902 Y_RNA.505-201ENST00000384489 102 ntBASIC1.99□□□□□ -2.09
CDX1P47902 MIR518A2-201ENST00000384966 87 ntBASIC1.99□□□□□ -2.09
CDX1P47902 MIR517A-201ENST00000385001 87 ntBASIC1.99□□□□□ -2.09
CDX1P47902 Y_RNA.599-201ENST00000410489 109 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNU2-41P-201ENST00000410991 178 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDX1P47902 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 AL513328.1-201ENST00000446460 224 ntBASIC1.99□□□□□ -2.09
CDX1P47902 HMGN2P18-201ENST00000450680 270 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AC055731.1-201ENST00000474387 401 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX1P47902 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 ACA59.1-201ENST00000515966 143 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNA5SP148-201ENST00000516527 94 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNU5F-4P-201ENST00000516581 114 ntBASIC1.99□□□□□ -2.09
CDX1P47902 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
CDX1P47902 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX1P47902 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.99□□□□□ -2.09
CDX1P47902 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX1P47902 AC090517.1-201ENST00000569307 266 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.99□□□□□ -2.09
CDX1P47902 SNORA59B-202ENST00000578183 701 ntBASIC1.99□□□□□ -2.09
CDX1P47902 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX1P47902 AC018638.8-201ENST00000588755 281 ntBASIC1.99□□□□□ -2.09
CDX1P47902 BNIP3P10-201ENST00000605360 577 ntBASIC1.99□□□□□ -2.09
CDX1P47902 AC005520.5-201ENST00000613926 164 ntBASIC1.99□□□□□ -2.09
CDX1P47902 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX1P47902 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDX1P47902 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX1P47902 Y_RNA.135-201ENST00000363439 95 ntBASIC1.98□□□□□ -2.09
CDX1P47902 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX1P47902 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
CDX1P47902 RNU6-784P-201ENST00000384330 106 ntBASIC1.98□□□□□ -2.09
CDX1P47902 RNU6-1148P-201ENST00000410992 104 ntBASIC1.98□□□□□ -2.09
CDX1P47902 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX1P47902 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX1P47902 AC005741.1-201ENST00000511094 432 ntBASIC1.98□□□□□ -2.09
CDX1P47902 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX1P47902 RN7SKP24-201ENST00000515888 284 ntBASIC1.98□□□□□ -2.09
CDX1P47902 RNU4-49P-201ENST00000516080 140 ntBASIC1.98□□□□□ -2.09
CDX1P47902 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX1P47902 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX1P47902 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.98□□□□□ -2.09
CDX1P47902 SNORD53-201ENST00000579969 78 ntBASIC1.98□□□□□ -2.09
CDX1P47902 AC124303.1-201ENST00000605703 360 ntBASIC1.98□□□□□ -2.09
CDX1P47902 CTSLP2-204ENST00000629029 392 ntBASIC1.98□□□□□ -2.09
CDX1P47902 IGHVIII-44-202ENST00000636235 289 ntBASIC1.98□□□□□ -2.09
CDX1P47902 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CDX1P47902 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDX1P47902 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX1P47902 RNU4-82P-201ENST00000362443 140 ntBASIC1.97□□□□□ -2.09
CDX1P47902 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
CDX1P47902 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
CDX1P47902 RNU6-510P-201ENST00000391239 108 ntBASIC1.97□□□□□ -2.09
CDX1P47902 SNORA11.2-201ENST00000408318 127 ntBASIC1.97□□□□□ -2.09
CDX1P47902 RN7SKP284-201ENST00000411002 343 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms