Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.37□□□□□ -2.47
HTTP42858 AC021146.9-201ENST00000512503 156 ntBASIC-0.37□□□□□ -2.47
HTTP42858 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
HTTP42858 AC004584.2-201ENST00000570407 410 ntBASIC-0.37□□□□□ -2.47
HTTP42858 AC080078.2-201ENST00000603766 501 ntBASIC-0.37□□□□□ -2.47
HTTP42858 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.37□□□□□ -2.47
HTTP42858 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.37□□□□□ -2.47
HTTP42858 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.37□□□□□ -2.47
HTTP42858 AC068205.3-201ENST00000636385 468 ntBASIC-0.37□□□□□ -2.47
HTTP42858 SUGT1P1-201ENST00000379514 476 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU2-15P-201ENST00000410692 191 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.38□□□□□ -2.47
HTTP42858 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.38□□□□□ -2.47
HTTP42858 AC003071.1-201ENST00000451219 789 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC048346.1-201ENST00000510247 144 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC105036.1-201ENST00000566222 271 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AL353997.4-201ENST00000586196 166 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AL353778.1-201ENST00000603149 408 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.38□□□□□ -2.47
HTTP42858 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.38□□□□□ -2.47
HTTP42858 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
HTTP42858 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.38□□□□□ -2.47
HTTP42858 RNA5SP109-201ENST00000391010 116 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU6-269P-201ENST00000391077 97 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AL121978.1-201ENST00000402778 359 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU7-165P-201ENST00000458864 60 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AL160314.1-201ENST00000490836 438 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.38□□□□□ -2.47
HTTP42858 AC116655.1-201ENST00000508324 901 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC018630.3-201ENST00000542637 96 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AP001981.2-201ENST00000603241 418 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC006157.1-201ENST00000611750 366 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AL391099.1-201ENST00000624635 187 ntBASIC-0.38□□□□□ -2.47
HTTP42858 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.38□□□□□ -2.47
HTTP42858 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.38□□□□□ -2.47
HTTP42858 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
HTTP42858 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU6-10P-201ENST00000384036 107 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU6-98P-201ENST00000384173 107 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RNU6-15P-201ENST00000384534 107 ntBASIC-0.38□□□□□ -2.47
HTTP42858 RPL17P35-201ENST00000432217 549 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC092001.1-201ENST00000453012 261 ntBASIC-0.38□□□□□ -2.47
HTTP42858 SCARNA17-201ENST00000516183 144 ntBASIC-0.38□□□□□ -2.47
HTTP42858 SNORD60.2-201ENST00000516883 86 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.38□□□□□ -2.47
HTTP42858 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.38□□□□□ -2.47
HTTP42858 MTND1P15-201ENST00000579262 949 ntBASIC-0.38□□□□□ -2.47
HTTP42858 BNIP3P31-201ENST00000604515 566 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC116165.2-201ENST00000616705 206 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC004009.2-201ENST00000623016 728 ntBASIC-0.38□□□□□ -2.47
HTTP42858 AC104985.3-201ENST00000623479 597 ntBASIC-0.38□□□□□ -2.47
HTTP42858 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.39□□□□□ -2.47
HTTP42858 RNU2-47P-201ENST00000410649 186 ntBASIC-0.39□□□□□ -2.47
HTTP42858 AC123900.1-201ENST00000420390 96 ntBASIC-0.39□□□□□ -2.47
HTTP42858 MTATP6P16-201ENST00000434543 526 ntBASIC-0.39□□□□□ -2.47
HTTP42858 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.39□□□□□ -2.47
HTTP42858 ELOCP30-201ENST00000447108 299 ntBASIC-0.39□□□□□ -2.47
HTTP42858 AC245047.8-201ENST00000456455 284 ntBASIC-0.39□□□□□ -2.47
HTTP42858 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.39□□□□□ -2.47
HTTP42858 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.39□□□□□ -2.47
HTTP42858 RNA5SP290-201ENST00000517133 127 ntBASIC-0.39□□□□□ -2.47
HTTP42858 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.39□□□□□ -2.47
HTTP42858 SUB1P2-201ENST00000556401 297 ntBASIC-0.39□□□□□ -2.47
HTTP42858 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
HTTP42858 MIR4324-201ENST00000584846 72 ntBASIC-0.39□□□□□ -2.47
HTTP42858 MTND4P4-201ENST00000439033 1366 ntBASIC-0.39□□□□□ -2.47
HTTP42858 SNORA63D-201ENST00000364359 132 ntBASIC-0.39□□□□□ -2.47
HTTP42858 SNORD51-201ENST00000384320 80 ntBASIC-0.39□□□□□ -2.47
HTTP42858 RNU6-925P-201ENST00000384629 104 ntBASIC-0.39□□□□□ -2.47
HTTP42858 AL008629.1-201ENST00000438615 184 ntBASIC-0.39□□□□□ -2.47
HTTP42858 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.39□□□□□ -2.47
HTTP42858 SNORD115-24-201ENST00000363528 82 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RNU6-140P-201ENST00000384566 108 ntBASIC-0.4□□□□□ -2.47
HTTP42858 MIR548B-201ENST00000385247 97 ntBASIC-0.4□□□□□ -2.47
HTTP42858 MIR760-201ENST00000390220 80 ntBASIC-0.4□□□□□ -2.47
HTTP42858 SKA2P1-201ENST00000425592 390 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC023512.1-201ENST00000444513 499 ntBASIC-0.4□□□□□ -2.47
HTTP42858 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.4□□□□□ -2.47
HTTP42858 AC023194.1-201ENST00000493084 308 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.4□□□□□ -2.47
HTTP42858 AC009646.1-201ENST00000510455 318 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC026782.1-201ENST00000512952 449 ntBASIC-0.4□□□□□ -2.47
HTTP42858 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RNU6-678P-201ENST00000516832 109 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC100830.2-201ENST00000581636 240 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC107952.2-201ENST00000606048 486 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC024940.5-201ENST00000622889 474 ntBASIC-0.4□□□□□ -2.47
HTTP42858 MIR1248-201ENST00000629190 106 ntBASIC-0.4□□□□□ -2.47
HTTP42858 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.4□□□□□ -2.47
HTTP42858 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
HTTP42858 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
HTTP42858 AL451046.2-201ENST00000403074 277 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.4□□□□□ -2.47
HTTP42858 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.4□□□□□ -2.47
HTTP42858 AC113420.1-201ENST00000507903 571 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RNU6-965P-201ENST00000516721 96 ntBASIC-0.4□□□□□ -2.47
HTTP42858 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
HTTP42858 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms