Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBEC1P41238 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBEC1P41238 SCARNA16.2-201ENST00000516520 172 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 RNA5SP384-201ENST00000516615 116 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBEC1P41238 CBX3P8-201ENST00000532412 525 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBEC1P41238 AC004486.1-201ENST00000546846 233 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AL078605.1-201ENST00000603529 500 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AL713866.2-201ENST00000603579 219 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 SCARNA4-201ENST00000629045 128 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBEC1P41238 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBEC1P41238 AC069528.2-201ENST00000624849 1991 ntBASIC2.35□□□□□ -2.03
APOBEC1P41238 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
APOBEC1P41238 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
APOBEC1P41238 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBEC1P41238 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
APOBEC1P41238 RNU6-1159P-201ENST00000362933 107 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RNU5B-2P-201ENST00000363036 113 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RNU6-595P-201ENST00000363944 107 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 SNORA25.6-201ENST00000364121 118 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBEC1P41238 Y_RNA.431-201ENST00000384086 102 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RNA5SP184-201ENST00000411071 108 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.34□□□□□ -2.03
APOBEC1P41238 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.34□□□□□ -2.03
APOBEC1P41238 AP000705.1-201ENST00000454567 350 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RN7SKP210-201ENST00000459176 261 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 SRIP1-201ENST00000489235 288 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RPL23AP75-201ENST00000491601 451 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 AC021146.2-201ENST00000504736 556 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.34□□□□□ -2.03
APOBEC1P41238 AC093303.1-201ENST00000514549 295 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RNU6-586P-201ENST00000517265 104 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.34□□□□□ -2.03
APOBEC1P41238 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.34□□□□□ -2.03
APOBEC1P41238 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 RPL23AP88-201ENST00000605759 454 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.34□□□□□ -2.03
APOBEC1P41238 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.34□□□□□ -2.03
APOBEC1P41238 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBEC1P41238 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
APOBEC1P41238 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
APOBEC1P41238 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 RNU4-15P-201ENST00000362613 141 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 RNU6-525P-201ENST00000363685 104 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 SNORA5B-201ENST00000363786 132 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 Y_RNA.187-201ENST00000363918 113 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 RNU1-109P-201ENST00000383960 147 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 SNORA75.6-201ENST00000391318 127 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 RNU2-52P-201ENST00000410680 190 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 AL358453.1-201ENST00000422522 250 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 MTND4P28-201ENST00000426217 387 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 ARL5AP4-201ENST00000430731 512 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 MTCO3P10-201ENST00000455912 772 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 AC087477.1-201ENST00000465747 340 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
APOBEC1P41238 RNA5SP356-201ENST00000515972 94 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 RNU6-264P-201ENST00000517134 104 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 AL590705.4-201ENST00000532209 134 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.33□□□□□ -2.04
APOBEC1P41238 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.33□□□□□ -2.04
APOBEC1P41238 AL138963.2-201ENST00000605137 226 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
APOBEC1P41238 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOBEC1P41238 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBEC1P41238 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBEC1P41238 MTND5P10-201ENST00000603719 1809 ntBASIC2.33□□□□□ -2.04
APOBEC1P41238 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBEC1P41238 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBEC1P41238 AL365361.1-201ENST00000566942 3481 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBEC1P41238 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 RNY1P16-201ENST00000363063 111 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 Y_RNA.146-201ENST00000363549 102 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 Y_RNA.315-201ENST00000365117 102 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 RNU6-1032P-201ENST00000384100 107 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 RNU6-890P-201ENST00000384121 107 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 Y_RNA.460-201ENST00000384255 102 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 MIR196B-201ENST00000384852 84 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 MTCYBP2-201ENST00000407745 171 ntBASIC2.32□□□□□ -2.04
APOBEC1P41238 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms