Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR4703-201ENST00000577728 79 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.25□□□□□ -2.21
RFC3P40938 PCGEM1.1-201ENST00000613431 131 ntBASIC1.25□□□□□ -2.21
RFC3P40938 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RFC3P40938 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AF246928.1-201ENST00000623768 87 ntBASIC1.25□□□□□ -2.21
RFC3P40938 AC091895.1-201ENST00000624494 256 ntBASIC1.25□□□□□ -2.21
RFC3P40938 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.25□□□□□ -2.21
RFC3P40938 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
RFC3P40938 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.25□□□□□ -2.21
RFC3P40938 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RFC3P40938 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RFC3P40938 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RFC3P40938 MTND4P14-201ENST00000435799 1354 ntBASIC1.24□□□□□ -2.21
RFC3P40938 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
RFC3P40938 RNU6-271P-201ENST00000363858 105 ntBASIC1.24□□□□□ -2.21
RFC3P40938 Y_RNA.226-201ENST00000364337 114 ntBASIC1.24□□□□□ -2.21
RFC3P40938 SNORA16.2-201ENST00000390991 127 ntBASIC1.24□□□□□ -2.21
RFC3P40938 SNORD70.1-201ENST00000391007 85 ntBASIC1.24□□□□□ -2.21
RFC3P40938 SNORA12.2-201ENST00000391040 156 ntBASIC1.24□□□□□ -2.21
RFC3P40938 MIR1267-201ENST00000408723 78 ntBASIC1.24□□□□□ -2.21
RFC3P40938 RNU2-41P-201ENST00000410991 178 ntBASIC1.24□□□□□ -2.21
RFC3P40938 C8orf59P1-201ENST00000429930 303 ntBASIC1.24□□□□□ -2.21
RFC3P40938 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC3P40938 MTND1P18-201ENST00000448191 573 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC022364.2-201ENST00000457963 554 ntBASIC1.24□□□□□ -2.21
RFC3P40938 RPL31P3-201ENST00000458430 332 ntBASIC1.24□□□□□ -2.21
RFC3P40938 SNORD42A-201ENST00000459584 64 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC007547.1-201ENST00000462177 490 ntBASIC1.24□□□□□ -2.21
RFC3P40938 TOMM22P6-201ENST00000465035 409 ntBASIC1.24□□□□□ -2.21
RFC3P40938 RPL26P26-201ENST00000480251 434 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC3P40938 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC3P40938 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC3P40938 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.24□□□□□ -2.21
RFC3P40938 ZNF321P-202ENST00000550843 495 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC078795.3-201ENST00000602913 472 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC245014.2-201ENST00000603689 287 ntBASIC1.24□□□□□ -2.21
RFC3P40938 AC246785.4-201ENST00000605374 287 ntBASIC1.24□□□□□ -2.21
RFC3P40938 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
RFC3P40938 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RFC3P40938 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RFC3P40938 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RFC3P40938 U8.1-201ENST00000362843 134 ntBASIC1.23□□□□□ -2.21
RFC3P40938 SNORD31B-201ENST00000364977 69 ntBASIC1.23□□□□□ -2.21
RFC3P40938 RNU6-1127P-201ENST00000384580 107 ntBASIC1.23□□□□□ -2.21
RFC3P40938 RNU6-360P-201ENST00000390944 104 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AC007098.1-201ENST00000420122 367 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
RFC3P40938 JTBP1-201ENST00000441314 247 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AC244505.5-201ENST00000443639 207 ntBASIC1.23□□□□□ -2.21
RFC3P40938 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.23□□□□□ -2.21
RFC3P40938 AC016632.1-201ENST00000503994 196 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.23□□□□□ -2.21
RFC3P40938 RNA5SP445-201ENST00000515889 115 ntBASIC1.23□□□□□ -2.21
RFC3P40938 RNU6-759P-201ENST00000516740 103 ntBASIC1.23□□□□□ -2.21
RFC3P40938 SNORD60.2-201ENST00000516883 86 ntBASIC1.23□□□□□ -2.21
RFC3P40938 EIF4A1P12-201ENST00000551910 141 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.23□□□□□ -2.21
RFC3P40938 AC064872.1-201ENST00000604823 1072 ntBASIC1.23□□□□□ -2.21
RFC3P40938 Z84480.1-201ENST00000605131 311 ntBASIC1.23□□□□□ -2.21
RFC3P40938 RPL17P51-201ENST00000605218 238 ntBASIC1.23□□□□□ -2.21
RFC3P40938 AL450472.1-202ENST00000637286 180 ntBASIC1.23□□□□□ -2.21
RFC3P40938 RNU6-552P-201ENST00000362869 119 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU6-203P-201ENST00000384038 104 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU6-297P-201ENST00000384636 107 ntBASIC1.22□□□□□ -2.21
RFC3P40938 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC3P40938 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.22□□□□□ -2.21
RFC3P40938 AC002486.1-201ENST00000435098 391 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.22□□□□□ -2.21
RFC3P40938 AL031274.1-201ENST00000450334 232 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC3P40938 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.22□□□□□ -2.21
RFC3P40938 AC016925.1-201ENST00000458303 298 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
RFC3P40938 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.22□□□□□ -2.21
RFC3P40938 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU6-567P-201ENST00000516746 107 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU6-1098P-201ENST00000516772 96 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AP003033.1-201ENST00000527244 415 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC3P40938 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC3P40938 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
RFC3P40938 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.22□□□□□ -2.21
RFC3P40938 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC3P40938 MIR3941-201ENST00000582572 103 ntBASIC1.22□□□□□ -2.21
RFC3P40938 RSL24D1P11-201ENST00000591045 491 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AC002044.1-201ENST00000606707 158 ntBASIC1.22□□□□□ -2.21
RFC3P40938 AL360219.1-201ENST00000610230 366 ntBASIC1.22□□□□□ -2.21
RFC3P40938 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.22□□□□□ -2.21
RFC3P40938 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
RFC3P40938 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
RFC3P40938 MIR302D-201ENST00000362275 68 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU4-21P-201ENST00000362802 126 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU1-76P-201ENST00000362903 159 ntBASIC1.21□□□□□ -2.22
RFC3P40938 RNU6-266P-201ENST00000364225 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms