Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC246785.4-201ENST00000605374 287 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 AC009161.2-201ENST00000624626 138 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 MIR1248-201ENST00000629190 106 ntBASIC1.28□□□□□ -2.2
BRCA1P38398 RNA5SP257-201ENST00000363023 116 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 RNU6-181P-201ENST00000363225 107 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 Y_RNA.178-201ENST00000363832 102 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 RNU6-517P-201ENST00000384362 110 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 RNA5SP201-201ENST00000410316 124 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MTCO3P41-201ENST00000414801 328 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
BRCA1P38398 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.27□□□□□ -2.21
BRCA1P38398 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.27□□□□□ -2.21
BRCA1P38398 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.27□□□□□ -2.21
BRCA1P38398 AC132479.1-201ENST00000449160 144 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 RPS27P1-201ENST00000450552 247 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 AC105313.1-201ENST00000509121 353 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.27□□□□□ -2.21
BRCA1P38398 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.27□□□□□ -2.21
BRCA1P38398 RNU6-445P-201ENST00000516949 107 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
BRCA1P38398 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.27□□□□□ -2.21
BRCA1P38398 AC022616.3-201ENST00000523940 148 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
BRCA1P38398 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
BRCA1P38398 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
BRCA1P38398 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
BRCA1P38398 RNU11-5P-201ENST00000391216 129 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 RPS29P13-201ENST00000402041 169 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCA1P38398 HSPE1P24-201ENST00000450782 238 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.26□□□□□ -2.21
BRCA1P38398 AC079140.3-201ENST00000511111 550 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 RNU6-685P-201ENST00000517088 95 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC109479.2-201ENST00000517842 174 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCA1P38398 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.26□□□□□ -2.21
BRCA1P38398 AC008752.3-201ENST00000588113 712 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AL078605.1-201ENST00000603529 500 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC090578.1-201ENST00000604955 591 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 Z84480.1-201ENST00000605131 311 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC103810.8-201ENST00000607347 118 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.26□□□□□ -2.21
BRCA1P38398 RNU1-62P-201ENST00000362599 164 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 MIR30A-201ENST00000385092 71 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 MIR454-201ENST00000390180 115 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCA1P38398 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCA1P38398 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 EPS15P1-201ENST00000448836 336 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 RNU6-1132P-201ENST00000459214 107 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.26□□□□□ -2.21
BRCA1P38398 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCA1P38398 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.26□□□□□ -2.21
BRCA1P38398 AC002400.1-201ENST00000569310 726 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 MIR3915-201ENST00000578518 97 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AC016925.2-201ENST00000605108 242 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 AP001506.1-201ENST00000615444 211 ntBASIC1.26□□□□□ -2.21
BRCA1P38398 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
BRCA1P38398 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
BRCA1P38398 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
BRCA1P38398 RNU6-414P-201ENST00000363705 104 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 RNU6-1019P-201ENST00000364424 107 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 RNY4P34-201ENST00000364779 95 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 MIR676-201ENST00000390702 67 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 SNORA40.3-201ENST00000390964 122 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 MTCO1P21-201ENST00000416634 589 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.25□□□□□ -2.21
BRCA1P38398 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.25□□□□□ -2.21
BRCA1P38398 MTCYBP1-201ENST00000454315 1119 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 AC092989.1-201ENST00000481235 277 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.25□□□□□ -2.21
BRCA1P38398 AC108078.1-201ENST00000508073 725 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
BRCA1P38398 AP002453.2-201ENST00000533503 320 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.25□□□□□ -2.21
BRCA1P38398 MIR3169-201ENST00000578032 83 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 AC005786.1-201ENST00000588553 154 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 AC009159.2-201ENST00000617603 606 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 SNORD98-201ENST00000636377 67 ntBASIC1.25□□□□□ -2.21
BRCA1P38398 RNU6-428P-201ENST00000362942 107 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 RNU6-743P-201ENST00000364151 106 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AL049545.1-201ENST00000401856 572 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 MIR1267-201ENST00000408723 78 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 MTND2P18-201ENST00000419962 1030 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.24□□□□□ -2.21
BRCA1P38398 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC093852.1-201ENST00000503587 266 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC114801.2-201ENST00000503825 781 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.24□□□□□ -2.21
BRCA1P38398 AL590229.1-201ENST00000603497 542 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC211469.2-201ENST00000605461 205 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC024933.1-201ENST00000608472 348 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.24□□□□□ -2.21
BRCA1P38398 AC131159.1-201ENST00000621854 213 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms