Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNORD116-20-201ENST00000384529 92 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 SNORA12-201ENST00000391162 147 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.32□□□□□ -2.46
SNCAP37840 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 MRPS36P1-201ENST00000421291 307 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.32□□□□□ -2.46
SNCAP37840 AL162725.1-201ENST00000435405 301 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AC104332.1-201ENST00000440471 797 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.32□□□□□ -2.46
SNCAP37840 RPL39P39-201ENST00000455840 151 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AC010531.2-201ENST00000465012 153 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6-856P-201ENST00000516959 98 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AP001189.2-201ENST00000527320 189 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.32□□□□□ -2.46
SNCAP37840 RPL23AP91-201ENST00000569211 455 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 MTND1P15-201ENST00000579262 949 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AC131055.1-201ENST00000584626 316 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AL136317.1-201ENST00000612653 226 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AC120349.2-201ENST00000625002 298 ntBASIC-0.32□□□□□ -2.46
SNCAP37840 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.32□□□□□ -2.46
SNCAP37840 RNU6V-201ENST00000384105 107 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 MIR518A1-201ENST00000385068 85 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 RN7SKP266-201ENST00000410232 287 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 ELOCP30-201ENST00000447108 299 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 MTCO3P10-201ENST00000455912 772 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.33□□□□□ -2.46
SNCAP37840 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
SNCAP37840 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 AC106754.2-201ENST00000623006 233 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 AL078595.3-201ENST00000623815 1166 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 AC008133.2-201ENST00000624540 351 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 AL512643.1-201ENST00000635735 524 ntBASIC-0.33□□□□□ -2.46
SNCAP37840 RNU4-15P-201ENST00000362613 141 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 SNORD31B-201ENST00000364977 69 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AL603865.2-201ENST00000401679 213 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.34□□□□□ -2.46
SNCAP37840 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.34□□□□□ -2.46
SNCAP37840 AC007395.1-201ENST00000451333 677 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.34□□□□□ -2.46
SNCAP37840 MTCO2P18-201ENST00000457151 658 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.34□□□□□ -2.46
SNCAP37840 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.34□□□□□ -2.46
SNCAP37840 AC092436.3-201ENST00000511788 257 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 LRRC34P2-201ENST00000514850 553 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.34□□□□□ -2.46
SNCAP37840 AC109810.1-201ENST00000534066 224 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AC141557.1-201ENST00000540982 400 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AC090049.2-201ENST00000550377 109 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 SUB1P2-201ENST00000556401 297 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AC004223.2-201ENST00000590309 544 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 AL390123.1-201ENST00000603216 237 ntBASIC-0.34□□□□□ -2.46
SNCAP37840 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.34□□□□□ -2.46
SNCAP37840 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SNCAP37840 RNU4-48P-201ENST00000365559 182 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 RPS3AP36-201ENST00000398190 775 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 MIR1197-201ENST00000408818 88 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 AL365338.1-201ENST00000422282 858 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.35□□□□□ -2.47
SNCAP37840 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 MTCO1P19-201ENST00000443487 500 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 RPL7P55-201ENST00000450522 746 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.35□□□□□ -2.47
SNCAP37840 RNU7-136P-201ENST00000458819 69 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 RPL23AP54-201ENST00000495129 419 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 HMGB1P28-201ENST00000507778 552 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.35□□□□□ -2.47
SNCAP37840 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.35□□□□□ -2.47
SNCAP37840 AL513423.1-201ENST00000621695 132 ntBASIC-0.35□□□□□ -2.47
SNCAP37840 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
SNCAP37840 RNU4-76P-201ENST00000364509 141 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 RNU6-514P-201ENST00000384208 107 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 RNA5SP323-201ENST00000391094 133 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNCAP37840 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNCAP37840 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNCAP37840 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 RPS25P9-201ENST00000435591 252 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 ART2BP-201ENST00000453501 499 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNCAP37840 RPS3AP17-201ENST00000472594 777 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 RNU1-86P-201ENST00000516108 154 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 SNORA31.10-201ENST00000516482 106 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 RNU1-107P-201ENST00000516617 154 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 SNORA76.2-201ENST00000517095 137 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.36□□□□□ -2.47
SNCAP37840 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNCAP37840 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AL157871.3-201ENST00000557231 293 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AC023827.1-201ENST00000569247 97 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AL391903.3-201ENST00000612158 163 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 MIR338-201ENST00000636369 67 ntBASIC-0.36□□□□□ -2.47
SNCAP37840 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms