Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL359314.1-201ENST00000616913 261 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AC090582.1-201ENST00000636321 199 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
RFC4P35249 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
RFC4P35249 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.73□□□□□ -2.13
RFC4P35249 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RFC4P35249 RNU6-105P-201ENST00000363909 104 ntBASIC1.73□□□□□ -2.13
RFC4P35249 RNU6-743P-201ENST00000364151 106 ntBASIC1.73□□□□□ -2.13
RFC4P35249 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RFC4P35249 SNORD14D-201ENST00000384390 87 ntBASIC1.73□□□□□ -2.13
RFC4P35249 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RFC4P35249 RNU2-29P-201ENST00000410423 189 ntBASIC1.73□□□□□ -2.13
RFC4P35249 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RFC4P35249 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.73□□□□□ -2.13
RFC4P35249 AC243964.1-201ENST00000441814 261 ntBASIC1.73□□□□□ -2.13
RFC4P35249 AL360221.1-201ENST00000445989 335 ntBASIC1.73□□□□□ -2.13
RFC4P35249 SNRPFP3-201ENST00000457792 225 ntBASIC1.73□□□□□ -2.13
RFC4P35249 RPL30P1-201ENST00000488676 339 ntBASIC1.73□□□□□ -2.13
RFC4P35249 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.73□□□□□ -2.13
RFC4P35249 AC092436.3-201ENST00000511788 257 ntBASIC1.73□□□□□ -2.13
RFC4P35249 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RFC4P35249 RNU6-970P-201ENST00000516312 107 ntBASIC1.73□□□□□ -2.13
RFC4P35249 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.73□□□□□ -2.13
RFC4P35249 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
RFC4P35249 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.73□□□□□ -2.13
RFC4P35249 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
RFC4P35249 AC107304.1-201ENST00000604229 296 ntBASIC1.73□□□□□ -2.13
RFC4P35249 RN7SKP299-201ENST00000606679 301 ntBASIC1.73□□□□□ -2.13
RFC4P35249 AL022345.1-201ENST00000607292 135 ntBASIC1.73□□□□□ -2.13
RFC4P35249 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.73□□□□□ -2.13
RFC4P35249 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.73□□□□□ -2.13
RFC4P35249 uc_338.11-201ENST00000619132 160 ntBASIC1.73□□□□□ -2.13
RFC4P35249 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.73□□□□□ -2.13
RFC4P35249 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.73□□□□□ -2.13
RFC4P35249 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RFC4P35249 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
RFC4P35249 RNU6-552P-201ENST00000362869 119 ntBASIC1.72□□□□□ -2.13
RFC4P35249 Y_RNA.77-201ENST00000362962 107 ntBASIC1.72□□□□□ -2.13
RFC4P35249 RNU6-692P-201ENST00000384496 107 ntBASIC1.72□□□□□ -2.13
RFC4P35249 MIR613-201ENST00000385248 95 ntBASIC1.72□□□□□ -2.13
RFC4P35249 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
RFC4P35249 Y_RNA.597-201ENST00000410463 100 ntBASIC1.72□□□□□ -2.13
RFC4P35249 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
RFC4P35249 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC4P35249 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC4P35249 FAM206BP-201ENST00000510179 541 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AC079140.3-201ENST00000511111 550 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AC105417.1-201ENST00000514691 285 ntBASIC1.72□□□□□ -2.13
RFC4P35249 RNU5F-2P-201ENST00000516066 82 ntBASIC1.72□□□□□ -2.13
RFC4P35249 SNORA25.17-201ENST00000517184 124 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.72□□□□□ -2.13
RFC4P35249 AC091135.1-201ENST00000585943 307 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AL136363.2-201ENST00000604173 851 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AC007684.1-201ENST00000609671 477 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AL354950.2-201ENST00000617939 290 ntBASIC1.72□□□□□ -2.13
RFC4P35249 AC009509.4-201ENST00000619202 509 ntBASIC1.72□□□□□ -2.13
RFC4P35249 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.72□□□□□ -2.13
RFC4P35249 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
RFC4P35249 RNU6-336P-201ENST00000364891 107 ntBASIC1.71□□□□□ -2.14
RFC4P35249 DEFB108C-201ENST00000400154 252 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.71□□□□□ -2.14
RFC4P35249 AL353193.1-201ENST00000421444 268 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC073464.1-201ENST00000429823 534 ntBASIC1.71□□□□□ -2.14
RFC4P35249 RPS15AP10-201ENST00000432472 382 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AL031274.1-201ENST00000450334 232 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AL356010.1-201ENST00000456364 102 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC112492.4-201ENST00000456549 352 ntBASIC1.71□□□□□ -2.14
RFC4P35249 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
RFC4P35249 RNU7-63P-201ENST00000459054 62 ntBASIC1.71□□□□□ -2.14
RFC4P35249 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.71□□□□□ -2.14
RFC4P35249 RPS3AP17-201ENST00000472594 777 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RFC4P35249 AC009646.1-201ENST00000510455 318 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC010493.1-201ENST00000513479 292 ntBASIC1.71□□□□□ -2.14
RFC4P35249 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.71□□□□□ -2.14
RFC4P35249 RN7SKP298-201ENST00000515950 94 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC022880.1-201ENST00000534017 973 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.71□□□□□ -2.14
RFC4P35249 HIF1AP1-201ENST00000553642 175 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.71□□□□□ -2.14
RFC4P35249 AC080078.3-201ENST00000605407 463 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
RFC4P35249 AL132822.1-201ENST00000617063 513 ntBASIC1.71□□□□□ -2.14
RFC4P35249 MTND4P14-201ENST00000435799 1354 ntBASIC1.71□□□□□ -2.14
RFC4P35249 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RFC4P35249 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RFC4P35249 RNU6-266P-201ENST00000364225 107 ntBASIC1.7□□□□□ -2.14
RFC4P35249 RNU1-93P-201ENST00000364704 169 ntBASIC1.7□□□□□ -2.14
RFC4P35249 Y_RNA.296-201ENST00000364930 108 ntBASIC1.7□□□□□ -2.14
RFC4P35249 RNU6-996P-201ENST00000365438 107 ntBASIC1.7□□□□□ -2.14
RFC4P35249 RNU6-1222P-201ENST00000384615 107 ntBASIC1.7□□□□□ -2.14
RFC4P35249 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RFC4P35249 RNU6-1158P-201ENST00000391167 107 ntBASIC1.7□□□□□ -2.14
RFC4P35249 MIR1262-201ENST00000408276 93 ntBASIC1.7□□□□□ -2.14
RFC4P35249 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
RFC4P35249 CDK8P2-201ENST00000415020 547 ntBASIC1.7□□□□□ -2.14
RFC4P35249 MTCO2P19-201ENST00000427513 598 ntBASIC1.7□□□□□ -2.14
RFC4P35249 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.7□□□□□ -2.14
RFC4P35249 AC002486.1-201ENST00000435098 391 ntBASIC1.7□□□□□ -2.14
RFC4P35249 IFNA20P-201ENST00000436840 528 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms