Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC007395.1-201ENST00000451333 677 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AC091179.1-201ENST00000461606 579 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AC145146.1-201ENST00000496370 254 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC12P31275 AC079598.5-201ENST00000547460 117 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 EIF4A1P12-201ENST00000551910 141 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC12P31275 KLKP1-201ENST00000595979 403 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AL109918.3-201ENST00000603072 338 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AC009779.6-201ENST00000603972 165 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 U2.14-201ENST00000615943 113 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC12P31275 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC12P31275 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC12P31275 snoU2_19.1-201ENST00000362361 80 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 RNA5SP322-201ENST00000363617 119 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 U3.9-201ENST00000363823 204 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 Y_RNA.331-201ENST00000365267 102 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 U8.11-201ENST00000384699 133 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 U8.12-201ENST00000384701 133 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 MIR634-201ENST00000385208 97 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 RNU2-64P-201ENST00000411315 191 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC017079.2-201ENST00000416102 485 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC097463.2-201ENST00000421074 142 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC027124.2-201ENST00000428249 105 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC12P31275 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC12P31275 RPS3P1-201ENST00000456781 192 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 U8.18-201ENST00000459285 133 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 RN7SL323P-201ENST00000494712 295 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC025554.1-201ENST00000505641 188 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 RNU4-71P-201ENST00000516258 113 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC12P31275 MIR4643-201ENST00000577473 78 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 AC127459.3-201ENST00000624328 466 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 IGHVIII-44-202ENST00000636235 289 ntBASIC3.43□□□□□ -1.86
HOXC12P31275 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC12P31275 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC12P31275 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HOXC12P31275 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC12P31275 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 AC092435.3-201ENST00000565538 3654 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 RNU1-62P-201ENST00000362599 164 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 RNU6-1027P-201ENST00000383998 107 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 MIR183-201ENST00000384958 110 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 MIR513A2-201ENST00000385249 127 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 SNORD58.1-201ENST00000391313 66 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 AL139247.1-201ENST00000422768 325 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC12P31275 IFNA11P-201ENST00000446352 526 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 RPL23AP3-201ENST00000453844 468 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 AC130289.1-201ENST00000577321 73 ntBASIC3.42□□□□□ -1.86
HOXC12P31275 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC12P31275 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC12P31275 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC12P31275 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
HOXC12P31275 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC12P31275 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC12P31275 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC12P31275 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC12P31275 IPO8P1-201ENST00000455509 3109 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 Y_RNA.44-201ENST00000362676 108 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC12P31275 NDUFB4P4-201ENST00000404822 243 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC12P31275 TBCAP1-201ENST00000436520 327 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 SNORA59A-201ENST00000459326 152 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 HSPE1P18-201ENST00000517602 280 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC12P31275 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 AC027176.1-201ENST00000560204 514 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC12P31275 AC055872.1-201ENST00000570978 278 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 MIR4298-201ENST00000584380 73 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 AC011471.1-201ENST00000585766 187 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 AC004467.1-201ENST00000615678 330 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 AL359854.1-201ENST00000614203 1594 ntBASIC3.41□□□□□ -1.86
HOXC12P31275 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HOXC12P31275 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
HOXC12P31275 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.86
HOXC12P31275 AC069528.2-201ENST00000624849 1991 ntBASIC3.4□□□□□ -1.86
HOXC12P31275 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC12P31275 SNORA25.1-201ENST00000362326 128 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 SNORA3.3-201ENST00000408712 125 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 ELOCP21-201ENST00000412558 336 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC12P31275 RAB28P5-201ENST00000427490 651 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 POLR2KP2-201ENST00000438155 177 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 AC004386.2-201ENST00000441858 148 ntBASIC3.4□□□□□ -1.87
HOXC12P31275 AC093663.1-201ENST00000497190 394 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms