Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 FRG2DP-202ENST00000566967 323 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 AC093249.1-201ENST00000567049 203 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA13P31271 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXA13P31271 AL138963.2-201ENST00000605137 226 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 AC084781.2-201ENST00000615568 161 ntBASIC2.52□□□□□ -2.01
HOXA13P31271 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA13P31271 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
HOXA13P31271 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HOXA13P31271 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 Y_RNA.40-201ENST00000362645 93 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RNU6-562P-201ENST00000362731 107 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RNU6-1059P-201ENST00000363752 98 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RPS29P13-201ENST00000402041 169 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RN7SKP158-201ENST00000410453 326 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 RNU6-370P-201ENST00000411008 104 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXA13P31271 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXA13P31271 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXA13P31271 U8.21-201ENST00000459536 136 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC130509.1-201ENST00000464158 433 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC008571.1-201ENST00000467232 300 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 YWHAEP4-201ENST00000505390 198 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXA13P31271 APOOP3-201ENST00000536787 586 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 HSPE1P4-201ENST00000550617 308 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXA13P31271 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA13P31271 AL022345.1-201ENST00000607292 135 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 HMGB1P24-202ENST00000615653 685 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 AC008121.3-201ENST00000618726 433 ntBASIC2.51□□□□□ -2.01
HOXA13P31271 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXA13P31271 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXA13P31271 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA13P31271 Y_RNA.132-201ENST00000363421 102 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-1317P-201ENST00000364582 104 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-128P-201ENST00000383976 107 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-1013P-201ENST00000384180 107 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-43P-201ENST00000384302 107 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA13P31271 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA13P31271 MTND3P9-201ENST00000429526 346 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA13P31271 AL121594.1-201ENST00000475906 575 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC096745.1-201ENST00000509945 370 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-559P-201ENST00000516151 98 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC115990.1-201ENST00000526957 301 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC113139.1-201ENST00000605049 239 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 AC099654.10-201ENST00000640395 161 ntBASIC2.5□□□□□ -2.01
HOXA13P31271 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
HOXA13P31271 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HOXA13P31271 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXA13P31271 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
HOXA13P31271 MTND4P23-201ENST00000447723 1363 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
HOXA13P31271 RNU6-790P-201ENST00000384479 105 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 BTF3L4P2-201ENST00000392798 346 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA13P31271 AF228730.4-201ENST00000421457 183 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AL590556.1-201ENST00000423231 483 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 MTND4P28-201ENST00000426217 387 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA13P31271 AL161788.1-201ENST00000441805 169 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXA13P31271 AC007677.1-201ENST00000445757 515 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 MTCO1P29-201ENST00000496868 288 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 RNU6-612P-201ENST00000516909 102 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 RNU6-586P-201ENST00000517265 104 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 CBX3P7-201ENST00000532876 502 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 TRAV32-201ENST00000553993 340 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.49□□□□□ -2.01
HOXA13P31271 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA13P31271 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA13P31271 VN1R107P-201ENST00000601784 209 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AL713866.2-201ENST00000603579 219 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AC092881.1-201ENST00000638218 2733 ntBASIC2.49□□□□□ -2.01
HOXA13P31271 AC009541.1-201ENST00000438279 2662 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 Y_RNA.138-201ENST00000363462 102 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 Y_RNA.151-201ENST00000363566 112 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 Y_RNA.504-201ENST00000384481 104 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 MIR521-1-201ENST00000384902 87 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 AL079342.1-201ENST00000401460 267 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 RNU6-325P-201ENST00000411132 105 ntBASIC2.48□□□□□ -2.01
HOXA13P31271 RPL37P10-201ENST00000412884 288 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms