Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 RNU6-379P-201ENST00000363813 104 ntBASIC3.1□□□□□ -1.91
CD40P25942 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
CD40P25942 SNORD63-201ENST00000384262 68 ntBASIC3.1□□□□□ -1.91
CD40P25942 Y_RNA.462-201ENST00000384268 102 ntBASIC3.1□□□□□ -1.91
CD40P25942 Y_RNA.477-201ENST00000384352 108 ntBASIC3.1□□□□□ -1.91
CD40P25942 MIR183-201ENST00000384958 110 ntBASIC3.1□□□□□ -1.91
CD40P25942 RNU4-30P-201ENST00000410245 143 ntBASIC3.1□□□□□ -1.91
CD40P25942 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
CD40P25942 CYCSP35-201ENST00000451978 304 ntBASIC3.1□□□□□ -1.91
CD40P25942 AC091179.1-201ENST00000461606 579 ntBASIC3.1□□□□□ -1.91
CD40P25942 AC117440.1-201ENST00000474107 571 ntBASIC3.1□□□□□ -1.91
CD40P25942 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.1□□□□□ -1.91
CD40P25942 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.1□□□□□ -1.91
CD40P25942 Y_RNA.680-201ENST00000516441 93 ntBASIC3.1□□□□□ -1.91
CD40P25942 SNORA70.18-201ENST00000516696 98 ntBASIC3.1□□□□□ -1.91
CD40P25942 CYCSP23-201ENST00000519781 313 ntBASIC3.1□□□□□ -1.91
CD40P25942 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.1□□□□□ -1.91
CD40P25942 DEFB108E-201ENST00000524692 240 ntBASIC3.1□□□□□ -1.91
CD40P25942 AC018448.1-201ENST00000552843 316 ntBASIC3.1□□□□□ -1.91
CD40P25942 TGIF1P1-201ENST00000558095 802 ntBASIC3.1□□□□□ -1.91
CD40P25942 MIR486-1-201ENST00000612171 68 ntBASIC3.1□□□□□ -1.91
CD40P25942 AP003355.3-201ENST00000623465 114 ntBASIC3.1□□□□□ -1.91
CD40P25942 U6.105-201ENST00000637379 88 ntBASIC3.1□□□□□ -1.91
CD40P25942 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 AC000403.1-201ENST00000613696 3585 ntBASIC3.1□□□□□ -1.91
CD40P25942 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
CD40P25942 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CD40P25942 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
CD40P25942 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD40P25942 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD40P25942 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.16-201ENST00000362421 102 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNA5SP50-201ENST00000363731 107 ntBASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.237-201ENST00000364439 102 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNA5SP72-201ENST00000364442 117 ntBASIC3.09□□□□□ -1.91
CD40P25942 SNORA68.1-201ENST00000364537 132 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU6-1318P-201ENST00000365389 103 ntBASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.489-201ENST00000384410 101 ntBASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.518-201ENST00000384552 113 ntBASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.541-201ENST00000384640 113 ntBASIC3.09□□□□□ -1.91
CD40P25942 Y_RNA.597-201ENST00000410463 100 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU5A-5P-201ENST00000411054 116 ntBASIC3.09□□□□□ -1.91
CD40P25942 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.09□□□□□ -1.91
CD40P25942 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CD40P25942 snoU13.22-201ENST00000459428 104 ntBASIC3.09□□□□□ -1.91
CD40P25942 RPL39P38-201ENST00000467018 153 ntBASIC3.09□□□□□ -1.91
CD40P25942 AC107222.1-201ENST00000510899 637 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU6-496P-201ENST00000516145 99 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU2-44P-201ENST00000516795 194 ntBASIC3.09□□□□□ -1.91
CD40P25942 RNU7-110P-201ENST00000516891 62 ntBASIC3.09□□□□□ -1.91
CD40P25942 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
CD40P25942 AP006245.1-201ENST00000522549 120 ntBASIC3.09□□□□□ -1.91
CD40P25942 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.09□□□□□ -1.91
CD40P25942 AC233702.2-202ENST00000562547 291 ntBASIC3.09□□□□□ -1.91
CD40P25942 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.09□□□□□ -1.91
CD40P25942 MIR3128-201ENST00000581957 66 ntBASIC3.09□□□□□ -1.91
CD40P25942 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.09□□□□□ -1.91
CD40P25942 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.09□□□□□ -1.91
CD40P25942 AC005176.2-201ENST00000596933 147 ntBASIC3.09□□□□□ -1.91
CD40P25942 AL713866.2-201ENST00000603579 219 ntBASIC3.09□□□□□ -1.91
CD40P25942 AC011373.1-201ENST00000607270 237 ntBASIC3.09□□□□□ -1.91
CD40P25942 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.09□□□□□ -1.91
CD40P25942 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CD40P25942 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CD40P25942 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CD40P25942 FAM35DP-201ENST00000323387 2712 ntBASIC3.09□□□□□ -1.92
CD40P25942 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CD40P25942 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.08□□□□□ -1.92
CD40P25942 AL021368.2-201ENST00000606125 5352 ntBASIC3.08□□□□□ -1.92
CD40P25942 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD40P25942 AL391987.6-201ENST00000305671 199 ntBASIC3.08□□□□□ -1.92
CD40P25942 SNORD81.1-201ENST00000363064 77 ntBASIC3.08□□□□□ -1.92
CD40P25942 Y_RNA.415-201ENST00000384012 112 ntBASIC3.08□□□□□ -1.92
CD40P25942 Y_RNA.498-201ENST00000384460 102 ntBASIC3.08□□□□□ -1.92
CD40P25942 RNU6-21P-201ENST00000384710 107 ntBASIC3.08□□□□□ -1.92
CD40P25942 MIR34B-201ENST00000385076 84 ntBASIC3.08□□□□□ -1.92
CD40P25942 MICF-203ENST00000432679 129 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC108059.2-201ENST00000434626 151 ntBASIC3.08□□□□□ -1.92
CD40P25942 HSPE1P25-201ENST00000455484 251 ntBASIC3.08□□□□□ -1.92
CD40P25942 AL049830.2-201ENST00000480072 201 ntBASIC3.08□□□□□ -1.92
CD40P25942 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.08□□□□□ -1.92
CD40P25942 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC074133.1-201ENST00000515696 183 ntBASIC3.08□□□□□ -1.92
CD40P25942 RNU6-1338P-201ENST00000516328 91 ntBASIC3.08□□□□□ -1.92
CD40P25942 RNU6-579P-201ENST00000516879 102 ntBASIC3.08□□□□□ -1.92
CD40P25942 RNU1-117P-201ENST00000517041 158 ntBASIC3.08□□□□□ -1.92
CD40P25942 AK6P2-201ENST00000549020 471 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40P25942 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40P25942 MIR4423-201ENST00000580922 80 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC105245.1-201ENST00000581934 244 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC012433.1-201ENST00000588916 398 ntBASIC3.08□□□□□ -1.92
CD40P25942 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
CD40P25942 SNORD11B-201ENST00000607707 90 ntBASIC3.08□□□□□ -1.92
CD40P25942 MIR7157-201ENST00000635801 60 ntBASIC3.08□□□□□ -1.92
CD40P25942 CEP170P1-201ENST00000502249 4587 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms