Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.21□□□□□ -2.06
BDNFP23560 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.21□□□□□ -2.06
BDNFP23560 AL158209.2-201ENST00000619266 216 ntBASIC2.21□□□□□ -2.06
BDNFP23560 MIR6863-201ENST00000636112 90 ntBASIC2.21□□□□□ -2.06
BDNFP23560 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
BDNFP23560 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
BDNFP23560 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.2□□□□□ -2.06
BDNFP23560 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
BDNFP23560 RNU6-661P-201ENST00000362409 107 ntBASIC2.2□□□□□ -2.06
BDNFP23560 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
BDNFP23560 RNU1-76P-201ENST00000362903 159 ntBASIC2.2□□□□□ -2.06
BDNFP23560 RNU6-259P-201ENST00000383999 107 ntBASIC2.2□□□□□ -2.06
BDNFP23560 SNORD73A-201ENST00000386062 65 ntBASIC2.2□□□□□ -2.06
BDNFP23560 EIF4E2P1-201ENST00000393781 255 ntBASIC2.2□□□□□ -2.06
BDNFP23560 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
BDNFP23560 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
BDNFP23560 RPL9P9-202ENST00000466501 579 ntBASIC2.2□□□□□ -2.06
BDNFP23560 AC021146.2-201ENST00000504736 556 ntBASIC2.2□□□□□ -2.06
BDNFP23560 AC091874.1-201ENST00000511402 339 ntBASIC2.2□□□□□ -2.06
BDNFP23560 AC025465.4-201ENST00000513422 638 ntBASIC2.2□□□□□ -2.06
BDNFP23560 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.2□□□□□ -2.06
BDNFP23560 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.2□□□□□ -2.06
BDNFP23560 AL450472.1-202ENST00000637286 180 ntBASIC2.2□□□□□ -2.06
BDNFP23560 MTND5P26-201ENST00000426018 1752 ntBASIC2.2□□□□□ -2.06
BDNFP23560 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
BDNFP23560 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
BDNFP23560 RNU6-1329P-201ENST00000365664 107 ntBASIC2.19□□□□□ -2.06
BDNFP23560 RNU6-38P-201ENST00000384085 107 ntBASIC2.19□□□□□ -2.06
BDNFP23560 RNU6-933P-201ENST00000384424 107 ntBASIC2.19□□□□□ -2.06
BDNFP23560 RNU6-1093P-201ENST00000391194 107 ntBASIC2.19□□□□□ -2.06
BDNFP23560 MIR300-201ENST00000401138 83 ntBASIC2.19□□□□□ -2.06
BDNFP23560 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
BDNFP23560 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
BDNFP23560 SNRPEP8-201ENST00000442866 260 ntBASIC2.19□□□□□ -2.06
BDNFP23560 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.19□□□□□ -2.06
BDNFP23560 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.19□□□□□ -2.06
BDNFP23560 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
BDNFP23560 RNU6-1098P-201ENST00000516772 96 ntBASIC2.19□□□□□ -2.06
BDNFP23560 AC025423.5-201ENST00000550230 219 ntBASIC2.19□□□□□ -2.06
BDNFP23560 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.19□□□□□ -2.06
BDNFP23560 ANP32BP3-201ENST00000559213 706 ntBASIC2.19□□□□□ -2.06
BDNFP23560 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
BDNFP23560 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
BDNFP23560 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
BDNFP23560 SNORA43.4-201ENST00000629559 138 ntBASIC2.19□□□□□ -2.06
BDNFP23560 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
BDNFP23560 SNORD114-6-201ENST00000364393 72 ntBASIC2.18□□□□□ -2.06
BDNFP23560 Y_RNA.381-201ENST00000365666 102 ntBASIC2.18□□□□□ -2.06
BDNFP23560 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC139712.2-201ENST00000424302 339 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.18□□□□□ -2.06
BDNFP23560 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.18□□□□□ -2.06
BDNFP23560 TPT1P7-201ENST00000458300 517 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC016925.1-201ENST00000458303 298 ntBASIC2.18□□□□□ -2.06
BDNFP23560 RNU6-1208P-201ENST00000459588 107 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC130509.1-201ENST00000464158 433 ntBASIC2.18□□□□□ -2.06
BDNFP23560 UBL5P3-201ENST00000475112 231 ntBASIC2.18□□□□□ -2.06
BDNFP23560 RPL38P4-201ENST00000502376 214 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC107401.1-201ENST00000503426 685 ntBASIC2.18□□□□□ -2.06
BDNFP23560 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.18□□□□□ -2.06
BDNFP23560 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.18□□□□□ -2.06
BDNFP23560 SCOCP1-201ENST00000554676 349 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC068944.2-201ENST00000610373 403 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.15-201ENST00000611544 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.16-201ENST00000613119 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.12-201ENST00000613778 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.20-201ENST00000613956 192 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.9-201ENST00000615427 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.11-201ENST00000616345 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.2-201ENST00000616535 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.3-201ENST00000617785 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.19-201ENST00000618602 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 RNU2-1-201ENST00000618664 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.6-201ENST00000619225 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.5-201ENST00000619465 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 AC137590.2-201ENST00000619709 240 ntBASIC2.18□□□□□ -2.06
BDNFP23560 U2.10-201ENST00000620268 191 ntBASIC2.18□□□□□ -2.06
BDNFP23560 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BDNFP23560 RNU6-562P-201ENST00000362731 107 ntBASIC2.17□□□□□ -2.06
BDNFP23560 MTCO3P40-201ENST00000392516 676 ntBASIC2.17□□□□□ -2.06
BDNFP23560 MIR320B2-201ENST00000408479 138 ntBASIC2.17□□□□□ -2.06
BDNFP23560 RNA5SP100-201ENST00000410903 110 ntBASIC2.17□□□□□ -2.06
BDNFP23560 RNA5SP59-201ENST00000410922 110 ntBASIC2.17□□□□□ -2.06
BDNFP23560 MTCO1P21-201ENST00000416634 589 ntBASIC2.17□□□□□ -2.06
BDNFP23560 RPL31P63-201ENST00000422565 375 ntBASIC2.17□□□□□ -2.06
BDNFP23560 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.17□□□□□ -2.06
BDNFP23560 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.17□□□□□ -2.06
BDNFP23560 TOMM22P6-201ENST00000465035 409 ntBASIC2.17□□□□□ -2.06
BDNFP23560 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
BDNFP23560 RNVU1-2-201ENST00000516326 135 ntBASIC2.17□□□□□ -2.06
BDNFP23560 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.17□□□□□ -2.06
BDNFP23560 AP005597.4-201ENST00000526762 229 ntBASIC2.17□□□□□ -2.06
BDNFP23560 PIGPP4-201ENST00000584447 307 ntBASIC2.17□□□□□ -2.06
BDNFP23560 AC104458.1-201ENST00000608243 463 ntBASIC2.17□□□□□ -2.06
BDNFP23560 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.17□□□□□ -2.06
BDNFP23560 MIR6715A-201ENST00000615929 79 ntBASIC2.17□□□□□ -2.06
BDNFP23560 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.17□□□□□ -2.06
BDNFP23560 OR5AK4P-201ENST00000635912 903 ntBASIC2.17□□□□□ -2.06
BDNFP23560 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms