Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL031274.1-201ENST00000450334 232 ntBASIC1.26□□□□□ -2.21
USF1P22415 RPL31P3-201ENST00000458430 332 ntBASIC1.26□□□□□ -2.21
USF1P22415 SCARNA18-201ENST00000459004 134 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC023790.1-201ENST00000482174 347 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.26□□□□□ -2.21
USF1P22415 AC016632.1-201ENST00000503994 196 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.26□□□□□ -2.21
USF1P22415 Y_RNA.675-201ENST00000516389 149 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.26□□□□□ -2.21
USF1P22415 MTCO3P23-201ENST00000561363 289 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC002044.1-201ENST00000606707 158 ntBASIC1.26□□□□□ -2.21
USF1P22415 PCGEM1.1-201ENST00000613431 131 ntBASIC1.26□□□□□ -2.21
USF1P22415 AC009161.2-201ENST00000624626 138 ntBASIC1.26□□□□□ -2.21
USF1P22415 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USF1P22415 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USF1P22415 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USF1P22415 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.25□□□□□ -2.21
USF1P22415 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
USF1P22415 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USF1P22415 RNU6-282P-201ENST00000365357 103 ntBASIC1.25□□□□□ -2.21
USF1P22415 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
USF1P22415 MTND2P18-201ENST00000419962 1030 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC007098.1-201ENST00000420122 367 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.25□□□□□ -2.21
USF1P22415 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.25□□□□□ -2.21
USF1P22415 AC139712.2-201ENST00000424302 339 ntBASIC1.25□□□□□ -2.21
USF1P22415 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USF1P22415 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
USF1P22415 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.25□□□□□ -2.21
USF1P22415 AC002486.1-201ENST00000435098 391 ntBASIC1.25□□□□□ -2.21
USF1P22415 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.25□□□□□ -2.21
USF1P22415 SNRPEP8-201ENST00000442866 260 ntBASIC1.25□□□□□ -2.21
USF1P22415 snoU13.9-201ENST00000458927 103 ntBASIC1.25□□□□□ -2.21
USF1P22415 TOMM22P6-201ENST00000465035 409 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC114801.2-201ENST00000503825 781 ntBASIC1.25□□□□□ -2.21
USF1P22415 AK3P2-201ENST00000507976 429 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC097473.1-201ENST00000508142 408 ntBASIC1.25□□□□□ -2.21
USF1P22415 ATP5EP1-201ENST00000510257 156 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC069113.1-201ENST00000517763 267 ntBASIC1.25□□□□□ -2.21
USF1P22415 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.25□□□□□ -2.21
USF1P22415 MIR5094-201ENST00000578766 85 ntBASIC1.25□□□□□ -2.21
USF1P22415 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
USF1P22415 AC078795.3-201ENST00000602913 472 ntBASIC1.25□□□□□ -2.21
USF1P22415 AL603755.1-201ENST00000619504 163 ntBASIC1.25□□□□□ -2.21
USF1P22415 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
USF1P22415 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.24□□□□□ -2.21
USF1P22415 AC245060.5-201ENST00000610778 3293 ntBASIC1.24□□□□□ -2.21
USF1P22415 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USF1P22415 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.24□□□□□ -2.21
USF1P22415 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USF1P22415 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USF1P22415 MIR340-201ENST00000362125 95 ntBASIC1.24□□□□□ -2.21
USF1P22415 RNU6-181P-201ENST00000363225 107 ntBASIC1.24□□□□□ -2.21
USF1P22415 RNU6-266P-201ENST00000364225 107 ntBASIC1.24□□□□□ -2.21
USF1P22415 RNU6-827P-201ENST00000365553 106 ntBASIC1.24□□□□□ -2.21
USF1P22415 Y_RNA.399-201ENST00000383955 105 ntBASIC1.24□□□□□ -2.21
USF1P22415 SNORA32.2-201ENST00000384049 122 ntBASIC1.24□□□□□ -2.21
USF1P22415 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
USF1P22415 RNU2-29P-201ENST00000410423 189 ntBASIC1.24□□□□□ -2.21
USF1P22415 RNU2-41P-201ENST00000410991 178 ntBASIC1.24□□□□□ -2.21
USF1P22415 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.24□□□□□ -2.21
USF1P22415 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
USF1P22415 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USF1P22415 AC098862.1-201ENST00000504991 413 ntBASIC1.24□□□□□ -2.21
USF1P22415 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.24□□□□□ -2.21
USF1P22415 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.24□□□□□ -2.21
USF1P22415 RNU6-567P-201ENST00000516746 107 ntBASIC1.24□□□□□ -2.21
USF1P22415 RNU6-445P-201ENST00000516949 107 ntBASIC1.24□□□□□ -2.21
USF1P22415 SUMO2P18-201ENST00000518873 252 ntBASIC1.24□□□□□ -2.21
USF1P22415 AP002963.1-201ENST00000530590 184 ntBASIC1.24□□□□□ -2.21
USF1P22415 EIF4A1P12-201ENST00000551910 141 ntBASIC1.24□□□□□ -2.21
USF1P22415 AC103996.1-201ENST00000555468 102 ntBASIC1.24□□□□□ -2.21
USF1P22415 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.24□□□□□ -2.21
USF1P22415 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
USF1P22415 RPL17P51-201ENST00000605218 238 ntBASIC1.24□□□□□ -2.21
USF1P22415 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.24□□□□□ -2.21
USF1P22415 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.24□□□□□ -2.21
USF1P22415 RNU6-552P-201ENST00000362869 119 ntBASIC1.23□□□□□ -2.21
USF1P22415 Y_RNA.67-201ENST00000362870 100 ntBASIC1.23□□□□□ -2.21
USF1P22415 RNU6-414P-201ENST00000363705 104 ntBASIC1.23□□□□□ -2.21
USF1P22415 Y_RNA.508-201ENST00000384502 114 ntBASIC1.23□□□□□ -2.21
USF1P22415 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
USF1P22415 SNORA26.8-201ENST00000391306 124 ntBASIC1.23□□□□□ -2.21
USF1P22415 MIR1304-201ENST00000408243 91 ntBASIC1.23□□□□□ -2.21
USF1P22415 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.23□□□□□ -2.21
USF1P22415 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.23□□□□□ -2.21
USF1P22415 NDUFA5P4-201ENST00000436704 385 ntBASIC1.23□□□□□ -2.21
USF1P22415 UBE2V1P8-201ENST00000437166 265 ntBASIC1.23□□□□□ -2.21
USF1P22415 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.23□□□□□ -2.21
USF1P22415 RPS27AP8-201ENST00000452665 445 ntBASIC1.23□□□□□ -2.21
USF1P22415 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.23□□□□□ -2.21
USF1P22415 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.23□□□□□ -2.21
USF1P22415 HMGN1P13-201ENST00000505795 138 ntBASIC1.23□□□□□ -2.21
USF1P22415 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.23□□□□□ -2.21
USF1P22415 AC105417.1-201ENST00000514691 285 ntBASIC1.23□□□□□ -2.21
USF1P22415 RNU5F-4P-201ENST00000516581 114 ntBASIC1.23□□□□□ -2.21
USF1P22415 AC060788.1-201ENST00000521318 469 ntBASIC1.23□□□□□ -2.21
USF1P22415 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
USF1P22415 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms