Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 U3.39-201ENST00000408569 239 ntBASIC4.08□□□□□ -1.76
LIG1P18858 RN7SKP51-201ENST00000410781 304 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.08□□□□□ -1.76
LIG1P18858 GPM6BP3-201ENST00000442797 145 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.08□□□□□ -1.76
LIG1P18858 AP001324.2-201ENST00000461163 319 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AC091021.1-201ENST00000468051 388 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AP001025.1-201ENST00000486139 332 ntBASIC4.08□□□□□ -1.76
LIG1P18858 RPL21P129-201ENST00000491732 478 ntBASIC4.08□□□□□ -1.76
LIG1P18858 RNU7-200P-201ENST00000516105 62 ntBASIC4.08□□□□□ -1.76
LIG1P18858 MRPS18CP4-201ENST00000535821 231 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AC026333.2-201ENST00000542164 106 ntBASIC4.08□□□□□ -1.76
LIG1P18858 HSPE1P4-201ENST00000550617 308 ntBASIC4.08□□□□□ -1.76
LIG1P18858 TGIF1P1-201ENST00000558095 802 ntBASIC4.08□□□□□ -1.76
LIG1P18858 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
LIG1P18858 MIR92B-201ENST00000607575 96 ntBASIC4.08□□□□□ -1.76
LIG1P18858 AC073349.3-201ENST00000617616 186 ntBASIC4.08□□□□□ -1.76
LIG1P18858 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.08□□□□□ -1.76
LIG1P18858 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIG1P18858 AC135776.4-201ENST00000624300 1904 ntBASIC4.07□□□□□ -1.76
LIG1P18858 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LIG1P18858 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LIG1P18858 RNU6-704P-201ENST00000364162 103 ntBASIC4.07□□□□□ -1.76
LIG1P18858 RNA5SP51-201ENST00000364750 119 ntBASIC4.07□□□□□ -1.76
LIG1P18858 Y_RNA.331-201ENST00000365267 102 ntBASIC4.07□□□□□ -1.76
LIG1P18858 SNORA1.3-201ENST00000384676 136 ntBASIC4.07□□□□□ -1.76
LIG1P18858 MIR544A-201ENST00000384855 91 ntBASIC4.07□□□□□ -1.76
LIG1P18858 RNU6-394P-201ENST00000410735 107 ntBASIC4.07□□□□□ -1.76
LIG1P18858 NDUFS5P4-201ENST00000412983 318 ntBASIC4.07□□□□□ -1.76
LIG1P18858 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.07□□□□□ -1.76
LIG1P18858 POLR2KP2-201ENST00000438155 177 ntBASIC4.07□□□□□ -1.76
LIG1P18858 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.07□□□□□ -1.76
LIG1P18858 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.07□□□□□ -1.76
LIG1P18858 RNU6-579P-201ENST00000516879 102 ntBASIC4.07□□□□□ -1.76
LIG1P18858 MIR2276-201ENST00000516886 89 ntBASIC4.07□□□□□ -1.76
LIG1P18858 RNA5SP54-201ENST00000516951 92 ntBASIC4.07□□□□□ -1.76
LIG1P18858 SNORA31.23-201ENST00000517219 133 ntBASIC4.07□□□□□ -1.76
LIG1P18858 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIG1P18858 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.07□□□□□ -1.76
LIG1P18858 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.07□□□□□ -1.76
LIG1P18858 MIR548AI-201ENST00000579940 88 ntBASIC4.07□□□□□ -1.76
LIG1P18858 AC006001.4-201ENST00000622243 395 ntBASIC4.07□□□□□ -1.76
LIG1P18858 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LIG1P18858 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIG1P18858 AL109809.4-201ENST00000603520 2185 ntBASIC4.06□□□□□ -1.76
LIG1P18858 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.06□□□□□ -1.76
LIG1P18858 RNU6-884P-201ENST00000363889 107 ntBASIC4.06□□□□□ -1.76
LIG1P18858 SNORA14A-201ENST00000364773 135 ntBASIC4.06□□□□□ -1.76
LIG1P18858 Y_RNA.383-201ENST00000383855 97 ntBASIC4.06□□□□□ -1.76
LIG1P18858 RNU6-1035P-201ENST00000384477 107 ntBASIC4.06□□□□□ -1.76
LIG1P18858 MIR487A-201ENST00000385009 80 ntBASIC4.06□□□□□ -1.76
LIG1P18858 FTH1P15-201ENST00000406984 280 ntBASIC4.06□□□□□ -1.76
LIG1P18858 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.06□□□□□ -1.76
LIG1P18858 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIG1P18858 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.06□□□□□ -1.76
LIG1P18858 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.06□□□□□ -1.76
LIG1P18858 CKS1BP7-201ENST00000522230 235 ntBASIC4.06□□□□□ -1.76
LIG1P18858 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.06□□□□□ -1.76
LIG1P18858 AC021231.3-201ENST00000558497 370 ntBASIC4.06□□□□□ -1.76
LIG1P18858 AC005176.2-201ENST00000596933 147 ntBASIC4.06□□□□□ -1.76
LIG1P18858 AC022441.3-201ENST00000605737 136 ntBASIC4.06□□□□□ -1.76
LIG1P18858 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.06□□□□□ -1.76
LIG1P18858 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
LIG1P18858 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.06□□□□□ -1.76
LIG1P18858 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIG1P18858 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIG1P18858 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.06□□□□□ -1.76
LIG1P18858 AC058791.1-201ENST00000608412 3198 ntBASIC4.05□□□□□ -1.76
LIG1P18858 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIG1P18858 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIG1P18858 AC092268.1-201ENST00000342691 405 ntBASIC4.05□□□□□ -1.76
LIG1P18858 RNU5F-3P-201ENST00000363767 117 ntBASIC4.05□□□□□ -1.76
LIG1P18858 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.05□□□□□ -1.76
LIG1P18858 RPS26P42-201ENST00000413485 326 ntBASIC4.05□□□□□ -1.76
LIG1P18858 MRPS10P1-201ENST00000448483 130 ntBASIC4.05□□□□□ -1.76
LIG1P18858 RPS4XP2-201ENST00000458402 793 ntBASIC4.05□□□□□ -1.76
LIG1P18858 AC010401.1-201ENST00000463867 348 ntBASIC4.05□□□□□ -1.76
LIG1P18858 CYCSP23-201ENST00000519781 313 ntBASIC4.05□□□□□ -1.76
LIG1P18858 RPL21P9-201ENST00000556149 474 ntBASIC4.05□□□□□ -1.76
LIG1P18858 AC233702.2-202ENST00000562547 291 ntBASIC4.05□□□□□ -1.76
LIG1P18858 MIR3144-201ENST00000579460 79 ntBASIC4.05□□□□□ -1.76
LIG1P18858 AC004832.4-201ENST00000608952 331 ntBASIC4.05□□□□□ -1.76
LIG1P18858 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LIG1P18858 Y_RNA.217-201ENST00000364214 105 ntBASIC4.04□□□□□ -1.76
LIG1P18858 CD24P4-201ENST00000382840 243 ntBASIC4.04□□□□□ -1.76
LIG1P18858 Y_RNA.595-201ENST00000410403 105 ntBASIC4.04□□□□□ -1.76
LIG1P18858 DBIP2-201ENST00000419076 262 ntBASIC4.04□□□□□ -1.76
LIG1P18858 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.04□□□□□ -1.76
LIG1P18858 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LIG1P18858 UQCRBP2-201ENST00000447827 297 ntBASIC4.04□□□□□ -1.76
LIG1P18858 Y_RNA.641-201ENST00000459414 105 ntBASIC4.04□□□□□ -1.76
LIG1P18858 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.04□□□□□ -1.76
LIG1P18858 RNU6-346P-201ENST00000516288 111 ntBASIC4.04□□□□□ -1.76
LIG1P18858 AP005660.1-201ENST00000522972 293 ntBASIC4.04□□□□□ -1.76
LIG1P18858 NACAP3-201ENST00000552100 481 ntBASIC4.04□□□□□ -1.76
LIG1P18858 AL451007.1-201ENST00000595491 289 ntBASIC4.04□□□□□ -1.76
LIG1P18858 AC010999.1-201ENST00000611856 324 ntBASIC4.04□□□□□ -1.76
LIG1P18858 AC007496.3-201ENST00000624987 3443 ntBASIC4.04□□□□□ -1.76
LIG1P18858 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIG1P18858 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms