Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC092593.1-201ENST00000515413 1815 ntBASIC3.41□□□□□ -1.86
ATF4P18848 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATF4P18848 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATF4P18848 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ATF4P18848 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ATF4P18848 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATF4P18848 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.4□□□□□ -1.86
ATF4P18848 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.4□□□□□ -1.86
ATF4P18848 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
ATF4P18848 SNORA51.4-201ENST00000364993 124 ntBASIC3.4□□□□□ -1.87
ATF4P18848 RNU6-326P-201ENST00000365480 107 ntBASIC3.4□□□□□ -1.87
ATF4P18848 RNU6-438P-201ENST00000365561 103 ntBASIC3.4□□□□□ -1.87
ATF4P18848 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ATF4P18848 SNORA67.2-201ENST00000384300 149 ntBASIC3.4□□□□□ -1.87
ATF4P18848 RNU6-102P-201ENST00000384485 104 ntBASIC3.4□□□□□ -1.87
ATF4P18848 MIR561-201ENST00000385216 97 ntBASIC3.4□□□□□ -1.87
ATF4P18848 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ATF4P18848 MIR1283-1-201ENST00000408494 87 ntBASIC3.4□□□□□ -1.87
ATF4P18848 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.4□□□□□ -1.87
ATF4P18848 RNU6-965P-201ENST00000516721 96 ntBASIC3.4□□□□□ -1.87
ATF4P18848 RNU2-31P-201ENST00000516954 155 ntBASIC3.4□□□□□ -1.87
ATF4P18848 SCARNA24.2-201ENST00000516968 130 ntBASIC3.4□□□□□ -1.87
ATF4P18848 AC105129.1-201ENST00000560250 297 ntBASIC3.4□□□□□ -1.87
ATF4P18848 MIR4715-201ENST00000584117 79 ntBASIC3.4□□□□□ -1.87
ATF4P18848 AC012433.1-201ENST00000588916 398 ntBASIC3.4□□□□□ -1.87
ATF4P18848 AC008749.1-201ENST00000597650 306 ntBASIC3.4□□□□□ -1.87
ATF4P18848 IGHVIII-44-202ENST00000636235 289 ntBASIC3.4□□□□□ -1.87
ATF4P18848 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATF4P18848 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
ATF4P18848 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.39□□□□□ -1.87
ATF4P18848 Y_RNA.16-201ENST00000362421 102 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNU6-379P-201ENST00000363813 104 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNU6-514P-201ENST00000384208 107 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.39□□□□□ -1.87
ATF4P18848 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ATF4P18848 AL357139.1-201ENST00000407792 426 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNA5SP504-201ENST00000410676 117 ntBASIC3.39□□□□□ -1.87
ATF4P18848 SNORA74C-2-201ENST00000411179 201 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AC091390.1-201ENST00000433904 331 ntBASIC3.39□□□□□ -1.87
ATF4P18848 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.39□□□□□ -1.87
ATF4P18848 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.39□□□□□ -1.87
ATF4P18848 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.39□□□□□ -1.87
ATF4P18848 Z96811.1-201ENST00000445880 108 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.39□□□□□ -1.87
ATF4P18848 HMGB3P17-201ENST00000504195 649 ntBASIC3.39□□□□□ -1.87
ATF4P18848 SERF1AP1-201ENST00000514575 187 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNU6-1023P-201ENST00000516137 106 ntBASIC3.39□□□□□ -1.87
ATF4P18848 RNU6-155P-201ENST00000516347 100 ntBASIC3.39□□□□□ -1.87
ATF4P18848 IGKV2-38-201ENST00000517443 247 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.39□□□□□ -1.87
ATF4P18848 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
ATF4P18848 MIR3128-201ENST00000581957 66 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AL109918.3-201ENST00000603072 338 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AL590240.4-201ENST00000616908 390 ntBASIC3.39□□□□□ -1.87
ATF4P18848 AC127459.3-201ENST00000624328 466 ntBASIC3.39□□□□□ -1.87
ATF4P18848 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.39□□□□□ -1.87
ATF4P18848 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
ATF4P18848 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.38□□□□□ -1.87
ATF4P18848 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.38□□□□□ -1.87
ATF4P18848 RNU6-545P-201ENST00000362681 104 ntBASIC3.38□□□□□ -1.87
ATF4P18848 Y_RNA.286-201ENST00000364813 102 ntBASIC3.38□□□□□ -1.87
ATF4P18848 SNORD31B-201ENST00000364977 69 ntBASIC3.38□□□□□ -1.87
ATF4P18848 Y_RNA.352-201ENST00000365439 102 ntBASIC3.38□□□□□ -1.87
ATF4P18848 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATF4P18848 Y_RNA.446-201ENST00000384178 104 ntBASIC3.38□□□□□ -1.87
ATF4P18848 RNU2-54P-201ENST00000410299 190 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AC003685.2-201ENST00000422795 395 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AC108059.2-201ENST00000434626 151 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AL445687.1-201ENST00000439946 251 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AL500522.2-201ENST00000448562 343 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.38□□□□□ -1.87
ATF4P18848 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
ATF4P18848 RAC1P2-201ENST00000511164 579 ntBASIC3.38□□□□□ -1.87
ATF4P18848 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.38□□□□□ -1.87
ATF4P18848 PARP1P2-201ENST00000556806 195 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AC090425.1-201ENST00000610007 140 ntBASIC3.38□□□□□ -1.87
ATF4P18848 AP005019.3-201ENST00000620418 560 ntBASIC3.38□□□□□ -1.87
ATF4P18848 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATF4P18848 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATF4P18848 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
ATF4P18848 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.38□□□□□ -1.87
ATF4P18848 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATF4P18848 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ATF4P18848 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.37□□□□□ -1.87
ATF4P18848 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.37□□□□□ -1.87
ATF4P18848 Y_RNA.477-201ENST00000384352 108 ntBASIC3.37□□□□□ -1.87
ATF4P18848 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATF4P18848 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
ATF4P18848 snoU13.22-201ENST00000459428 104 ntBASIC3.37□□□□□ -1.87
ATF4P18848 RPL12P20-201ENST00000475538 479 ntBASIC3.37□□□□□ -1.87
ATF4P18848 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATF4P18848 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.37□□□□□ -1.87
ATF4P18848 AC055872.1-201ENST00000570978 278 ntBASIC3.37□□□□□ -1.87
ATF4P18848 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.37□□□□□ -1.87
ATF4P18848 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATF4P18848 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.36□□□□□ -1.87
ATF4P18848 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.36□□□□□ -1.87
ATF4P18848 SNORA25.1-201ENST00000362326 128 ntBASIC3.36□□□□□ -1.87
ATF4P18848 Y_RNA.101-201ENST00000363154 102 ntBASIC3.36□□□□□ -1.87
ATF4P18848 RNU6-1318P-201ENST00000365389 103 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms