Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.13□□□□□ -2.07
ERCC2P18074 RNU6-718P-201ENST00000516166 105 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.13□□□□□ -2.07
ERCC2P18074 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.13□□□□□ -2.07
ERCC2P18074 AC078899.2-201ENST00000595282 212 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 AC090517.2-201ENST00000614966 680 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 AC098679.4-201ENST00000624241 654 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.13□□□□□ -2.07
ERCC2P18074 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
ERCC2P18074 RNA5SP276-201ENST00000362580 94 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 RNU6-234P-201ENST00000365229 104 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 VN1R36P-201ENST00000414936 291 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.12□□□□□ -2.07
ERCC2P18074 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
ERCC2P18074 BX510359.4-201ENST00000423750 193 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC096920.1-201ENST00000423991 241 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 USP9YP28-201ENST00000435142 589 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 MTCO1P29-201ENST00000496868 288 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.12□□□□□ -2.07
ERCC2P18074 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.12□□□□□ -2.07
ERCC2P18074 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.12□□□□□ -2.07
ERCC2P18074 CPDP1-201ENST00000579660 283 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.12□□□□□ -2.07
ERCC2P18074 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.12□□□□□ -2.07
ERCC2P18074 AC025754.2-201ENST00000606491 432 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 MIR3688-2-201ENST00000636963 87 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
ERCC2P18074 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ERCC2P18074 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
ERCC2P18074 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ERCC2P18074 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
ERCC2P18074 AC027514.1-201ENST00000588561 1603 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
ERCC2P18074 Y_RNA.123-201ENST00000363338 102 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RNU6-534P-201ENST00000364877 106 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 Y_RNA.295-201ENST00000364918 102 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RNU6-877P-201ENST00000383868 107 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RNU6-128P-201ENST00000383976 107 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 Y_RNA.453-201ENST00000384223 109 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 Y_RNA.530-201ENST00000384587 101 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 MIR208B-201ENST00000401172 77 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RN7SKP284-201ENST00000411002 343 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 EIF1AXP1-201ENST00000419267 435 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 WARS2P1-201ENST00000429678 537 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 UBE2V1P8-201ENST00000437166 265 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RPL23AP7-203ENST00000449021 469 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 HMGN2P18-201ENST00000450680 270 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.11□□□□□ -2.07
ERCC2P18074 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RNU7-66P-201ENST00000459469 62 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RN7SL429P-201ENST00000479090 223 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 AC092989.1-201ENST00000481235 277 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RN7SL489P-201ENST00000486185 223 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RN7SL327P-201ENST00000488659 223 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 AC114801.2-201ENST00000503825 781 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 FAM206BP-201ENST00000510179 541 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 RNA5SP490-201ENST00000517141 136 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 MTND1P5-201ENST00000517906 940 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.11□□□□□ -2.07
ERCC2P18074 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.11□□□□□ -2.07
ERCC2P18074 EIF4A1P12-201ENST00000551910 141 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.11□□□□□ -2.07
ERCC2P18074 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.11□□□□□ -2.07
ERCC2P18074 RN7SL853P-201ENST00000617250 223 ntBASIC2.11□□□□□ -2.07
ERCC2P18074 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ERCC2P18074 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ERCC2P18074 ZNF702P-202ENST00000434269 1966 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.1□□□□□ -2.07
ERCC2P18074 Y_RNA.99-201ENST00000363138 105 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 Y_RNA.573-201ENST00000384763 105 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 MIR521-1-201ENST00000384902 87 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 RNU6-192P-201ENST00000391253 100 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AL357139.1-201ENST00000407792 426 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 RNU2-41P-201ENST00000410991 178 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 RNU6-373P-201ENST00000411247 98 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ERCC2P18074 MTND1P23-201ENST00000416931 372 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC027124.2-201ENST00000428249 105 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 MTCO3P18-201ENST00000440206 761 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 snoU13.6-201ENST00000458785 104 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 RNU7-187P-201ENST00000458985 68 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC007547.1-201ENST00000462177 490 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC096745.1-201ENST00000509945 370 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC011352.1-201ENST00000512300 793 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms