Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNU6-177P-201ENST00000411257 104 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MRPS36P1-201ENST00000421291 307 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC079776.3-201ENST00000450665 370 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC093534.1-201ENST00000504977 132 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 SUMO2P5-201ENST00000506790 245 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 RNU4-77P-201ENST00000516692 156 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC011195.1-201ENST00000578177 177 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MIR4514-201ENST00000581410 57 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MIR4768-201ENST00000585270 74 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC023932.2-201ENST00000603176 175 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC091805.2-201ENST00000603848 235 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC090186.1-201ENST00000605991 572 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AL513423.1-201ENST00000621695 132 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 AC004808.1-201ENST00000627671 721 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MIR4315-1-201ENST00000636800 73 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 MIR4315-2-201ENST00000640925 73 ntBASIC-0.13□□□□□ -2.43
HIST1H1DP16402 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.14□□□□□ -2.43
HIST1H1DP16402 RNU5B-1-201ENST00000363286 116 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 RNU6-142P-201ENST00000384019 107 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 MIR10A-201ENST00000385043 110 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HIST1H1DP16402 MIR1305-201ENST00000408300 86 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 RNA5SP504-201ENST00000410676 117 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
HIST1H1DP16402 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.14□□□□□ -2.43
HIST1H1DP16402 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 RNU6-677P-201ENST00000516914 101 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 AC021451.1-201ENST00000523498 1129 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 MIR3146-201ENST00000580367 79 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.14□□□□□ -2.43
HIST1H1DP16402 AL390123.1-201ENST00000603216 237 ntBASIC-0.14□□□□□ -2.43
HIST1H1DP16402 RNA5SP62-201ENST00000363457 110 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AL359704.1-201ENST00000411586 781 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H1DP16402 RPL23AP50-201ENST00000434149 455 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 SNRPGP12-201ENST00000449481 213 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AC245047.8-201ENST00000456455 284 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.15□□□□□ -2.43
HIST1H1DP16402 MTND3P5-201ENST00000512798 333 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 MTND4LP26-201ENST00000518144 282 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AC090049.2-201ENST00000550377 109 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AC021231.3-201ENST00000558497 370 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AC004987.4-201ENST00000603383 338 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 AC231657.1-201ENST00000624313 397 ntBASIC-0.15□□□□□ -2.43
HIST1H1DP16402 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.15□□□□□ -2.43
HIST1H1DP16402 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
HIST1H1DP16402 RNU6-792P-201ENST00000363490 107 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 RNU4-76P-201ENST00000364509 141 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.16□□□□□ -2.44
HIST1H1DP16402 BX664727.1-201ENST00000416024 466 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 DEFB130D-201ENST00000426866 237 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.16□□□□□ -2.44
HIST1H1DP16402 ZNF886P-201ENST00000450781 723 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 AK3P2-201ENST00000507976 429 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.16□□□□□ -2.44
HIST1H1DP16402 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 SNORA62.5-201ENST00000516634 120 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 AC024995.1-201ENST00000523014 93 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 DEFB108A-201ENST00000530110 222 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.16□□□□□ -2.44
HIST1H1DP16402 SUB1P2-201ENST00000556401 297 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 SNRPGP20-201ENST00000604477 205 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 AL136317.1-201ENST00000612653 226 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 MIR6734-201ENST00000621166 68 ntBASIC-0.16□□□□□ -2.44
HIST1H1DP16402 RNU6-853P-201ENST00000364306 107 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 SNORD114-9-201ENST00000364370 72 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 RPS20P2-201ENST00000402520 389 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 MTND4LP7-201ENST00000431728 294 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AL139824.2-201ENST00000458731 1095 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
HIST1H1DP16402 SNORA4-201ENST00000584302 138 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AC174048.1-201ENST00000603389 144 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 RPL21P136-201ENST00000605378 396 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AC069545.1-201ENST00000605671 358 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AL162730.1-201ENST00000605734 292 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AC022709.1-201ENST00000615967 87 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AC007742.2-201ENST00000618226 398 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AC136475.10-201ENST00000620253 385 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 AL157786.1-207ENST00000627771 695 ntBASIC-0.17□□□□□ -2.44
HIST1H1DP16402 RNU4-48P-201ENST00000365559 182 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RNA5SP323-201ENST00000391094 133 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RPS3AP36-201ENST00000398190 775 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AL451046.2-201ENST00000403074 277 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.18□□□□□ -2.44
HIST1H1DP16402 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.18□□□□□ -2.44
HIST1H1DP16402 MTCYBP10-201ENST00000424905 650 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RNU7-14P-201ENST00000459331 62 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC113347.3-201ENST00000509113 148 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RNU1-86P-201ENST00000516108 154 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RNU6-150P-201ENST00000516237 95 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms