Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 UBL5P4-201ENST00000562584 236 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC012493.2-201ENST00000595083 291 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC005296.1-201ENST00000616145 209 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC006001.4-201ENST00000622243 395 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 Y_RNA.331-201ENST00000365267 102 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MIR487A-201ENST00000385009 80 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MIR10B-201ENST00000385011 110 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MIR569-201ENST00000385228 96 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 SNORD17-201ENST00000390930 237 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 RNA5SP38-201ENST00000410750 119 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 RPL23AP95-201ENST00000426806 265 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 WARS2P1-201ENST00000429678 537 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AL714022.1-201ENST00000439897 151 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AC008267.6-201ENST00000441664 139 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 SNRPGP3-201ENST00000469405 227 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 TRBV12-2-201ENST00000489763 344 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MIR5695-201ENST00000579717 85 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 YPEL5P2-201ENST00000605553 359 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 MIR7112-201ENST00000616126 65 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AL138880.2-201ENST00000616214 239 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AL353746.1-201ENST00000566293 6881 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 AL109809.4-201ENST00000603520 2185 ntBASIC4.77□□□□□ -1.65
CSB-PGBD3P0DP91 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-211P-201ENST00000384047 107 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-281P-201ENST00000384212 103 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-198P-201ENST00000384258 104 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 MIR329-1-201ENST00000385028 80 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 SNORA48.5-201ENST00000391143 135 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 AL161651.1-201ENST00000440882 223 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-966P-201ENST00000516479 104 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 snoU18.1-201ENST00000629629 71 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 AL365361.1-201ENST00000566942 3481 ntBASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSB-PGBD3P0DP91 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 Y_RNA.412-201ENST00000384001 104 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-142P-201ENST00000384019 107 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 RPS15AP5-201ENST00000436276 388 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 SEPT7P4-201ENST00000437076 306 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC055872.1-201ENST00000570978 278 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 AC004944.1-201ENST00000517807 3059 ntBASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CSB-PGBD3P0DP91 RNA5SP197-201ENST00000363357 119 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 RNU4-84P-201ENST00000364200 139 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 Y_RNA.230-201ENST00000364348 109 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-153P-201ENST00000364422 104 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-1141P-201ENST00000364520 107 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 Y_RNA.273-201ENST00000364703 102 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AC023141.4-201ENST00000412031 328 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AL390729.2-201ENST00000416137 156 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 U3.44-201ENST00000458938 192 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 RPS4XP22-201ENST00000480755 780 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AC010409.1-201ENST00000487382 476 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 SUMO2P18-201ENST00000518873 252 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 CKS1BP7-201ENST00000522230 235 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 HSPE1P4-201ENST00000550617 308 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AL133393.1-201ENST00000603277 287 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 SNORA43.4-201ENST00000629559 138 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 AP001486.2-201ENST00000561652 5113 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 CEP170P1-201ENST00000502249 4587 ntBASIC4.74□□□□□ -1.65
CSB-PGBD3P0DP91 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-151P-201ENST00000364158 107 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 SNORA29-201ENST00000384183 140 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-1145P-201ENST00000384246 107 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms