Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPS20P10-201ENST00000451209 253 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 SNORA31.2-201ENST00000516019 134 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 RNU5F-4P-201ENST00000516581 114 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.41□□□□□ -2.34
FREM3P0C091 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.41□□□□□ -2.34
FREM3P0C091 AC090517.1-201ENST00000569307 266 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 AC092106.3-201ENST00000611308 722 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 AL512506.1-201ENST00000613918 449 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 AP000943.4-201ENST00000622912 357 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 SNORD98-201ENST00000636377 67 ntBASIC0.41□□□□□ -2.34
FREM3P0C091 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
FREM3P0C091 snoU2-30.2-201ENST00000362805 70 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 Y_RNA.294-201ENST00000364916 102 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 Y_RNA.412-201ENST00000384001 104 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 RNU6-43P-201ENST00000384302 107 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
FREM3P0C091 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
FREM3P0C091 AL591043.1-201ENST00000432461 424 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.4□□□□□ -2.35
FREM3P0C091 PDCD5P2-201ENST00000507570 312 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 RNU7-51P-201ENST00000516560 62 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC107934.1-201ENST00000522215 217 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC023050.2-201ENST00000544968 387 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC040896.1-201ENST00000613819 479 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC097372.5-201ENST00000623665 376 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AL159152.1-201ENST00000635019 2587 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.4□□□□□ -2.35
FREM3P0C091 RNU4-15P-201ENST00000362613 141 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 SNORA63.3-201ENST00000362682 132 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 MIR558-201ENST00000384920 94 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 RNU2-39P-201ENST00000410604 198 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC244670.1-201ENST00000436879 112 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC011406.1-201ENST00000512440 370 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 SUMO2P16-201ENST00000519475 264 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AP003072.2-201ENST00000527756 676 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 ZNF321P-202ENST00000550843 495 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC004817.2-201ENST00000561794 651 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 MIR3664-201ENST00000579074 99 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC108747.1-201ENST00000609508 535 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC136475.10-201ENST00000620253 385 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 AC068880.4-201ENST00000623082 495 ntBASIC0.4□□□□□ -2.35
FREM3P0C091 RNU6-511P-201ENST00000363496 107 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 SNORD31B-201ENST00000364977 69 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 SNORD99-201ENST00000408612 74 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.39□□□□□ -2.35
FREM3P0C091 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 RPL31P35-201ENST00000431058 377 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 AC073614.1-201ENST00000438690 650 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 AC016925.1-201ENST00000458303 298 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 BNIP3P6-201ENST00000549284 499 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.39□□□□□ -2.35
FREM3P0C091 AC024940.5-201ENST00000622889 474 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
FREM3P0C091 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
FREM3P0C091 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
FREM3P0C091 MIR1284-201ENST00000408337 120 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC063976.4-201ENST00000421971 163 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC007969.2-201ENST00000441891 191 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 MTCYBP1-201ENST00000454315 1119 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC048334.1-201ENST00000477975 159 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 RNA5SP255-201ENST00000516370 107 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC011979.2-201ENST00000527568 352 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AL121579.1-201ENST00000555129 305 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AL034555.1-201ENST00000604816 211 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC063943.3-201ENST00000615562 356 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
FREM3P0C091 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 Y_RNA.192-201ENST00000363977 102 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 SNORA4.2-201ENST00000365313 147 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 MIR942-201ENST00000401111 86 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 RPS24P1-201ENST00000438550 371 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC007327.1-201ENST00000447461 264 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC010531.2-201ENST00000465012 153 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 AC004812.1-201ENST00000540773 146 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 SNORD3E-202ENST00000627253 216 ntBASIC0.38□□□□□ -2.35
FREM3P0C091 RNU6-462P-201ENST00000362659 105 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 SNORD32B-201ENST00000364460 84 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 RNU6-190P-201ENST00000384154 102 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 USP9YP14-201ENST00000430663 563 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 ACA64.5-201ENST00000516207 127 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.37□□□□□ -2.35
FREM3P0C091 MIR3923-201ENST00000579521 83 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 MIR340-201ENST00000362125 95 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 SNORA12.2-201ENST00000391040 156 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 AL122001.1-201ENST00000457027 370 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 RAP1BP2-201ENST00000478270 544 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 TRBVA-201ENST00000498804 316 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 HMGN1P12-201ENST00000499125 195 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 RNU2-10P-201ENST00000516375 211 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 SNORA70.22-201ENST00000517160 124 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 MTCO2P2-201ENST00000591258 225 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 AL353149.1-201ENST00000610667 244 ntBASIC0.37□□□□□ -2.35
FREM3P0C091 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms