Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNRPA1P09661 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNRPA1P09661 Y_RNA.380-201ENST00000365663 111 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 SNORA51.11-201ENST00000384442 131 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SNRPA1P09661 SNORA69.1-201ENST00000390904 137 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 RNU6-1109P-201ENST00000391187 107 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 BPY2DP-201ENST00000422208 265 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 OOSP1P1-201ENST00000423265 274 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 AL031659.1-201ENST00000447075 539 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 MTCO3P8-201ENST00000453691 755 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 AC091874.1-201ENST00000511402 339 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 RNA5SP320-201ENST00000516263 124 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.32□□□□□ -1.88
SNRPA1P09661 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.32□□□□□ -1.88
SNRPA1P09661 AC004817.2-201ENST00000561794 651 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.32□□□□□ -1.88
SNRPA1P09661 AL021879.1-201ENST00000611756 288 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.32□□□□□ -1.88
SNRPA1P09661 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNRPA1P09661 ADAM3A-203ENST00000461344 2157 ntBASIC3.32□□□□□ -1.88
SNRPA1P09661 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SNRPA1P09661 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
SNRPA1P09661 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRPA1P09661 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.401-201ENST00000383965 117 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.405-201ENST00000383979 100 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.451-201ENST00000384200 100 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.524-201ENST00000384564 100 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.561-201ENST00000384694 100 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 MIR628-201ENST00000385229 95 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 SNORA12.2-201ENST00000391040 156 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 Y_RNA.592-201ENST00000410274 109 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 AC114482.1-201ENST00000418010 247 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.31□□□□□ -1.88
SNRPA1P09661 Z82188.1-201ENST00000436709 154 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 AL731563.1-201ENST00000442202 214 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 HMGN2P10-201ENST00000448085 265 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 RN7SKP210-201ENST00000459176 261 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRPA1P09661 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRPA1P09661 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.31□□□□□ -1.88
SNRPA1P09661 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRPA1P09661 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 U4.3-201ENST00000621047 82 ntBASIC3.31□□□□□ -1.88
SNRPA1P09661 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNRPA1P09661 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNRPA1P09661 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNRPA1P09661 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNRPA1P09661 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU6-702P-201ENST00000364982 107 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU6-708P-201ENST00000384217 107 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU6-1245P-201ENST00000411130 106 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRPA1P09661 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRPA1P09661 RNU7-87P-201ENST00000459343 62 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRPA1P09661 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 NACAP3-201ENST00000552100 481 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 AC021739.1-201ENST00000559631 174 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.3□□□□□ -1.88
SNRPA1P09661 AC110491.1-201ENST00000562191 2010 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNRPA1P09661 AC233981.2-201ENST00000611524 1614 ntBASIC3.3□□□□□ -1.88
SNRPA1P09661 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRPA1P09661 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNRPA1P09661 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRPA1P09661 RNU6-968P-201ENST00000384076 107 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 MIR518C-201ENST00000384822 101 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 MIR190B-201ENST00000401119 79 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC074117.2-201ENST00000417130 397 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
SNRPA1P09661 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRPA1P09661 DYNLT3P2-201ENST00000442517 295 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AL513124.1-201ENST00000450410 614 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 TOMM22P6-201ENST00000465035 409 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 TRBV12-1-201ENST00000479785 344 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC008413.1-201ENST00000511864 177 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 RNU6-397P-201ENST00000516226 104 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AP000867.2-201ENST00000532468 320 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRPA1P09661 AP002770.2-201ENST00000543613 532 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRPA1P09661 AC110588.1-201ENST00000559699 137 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRPA1P09661 RAC1P9-201ENST00000604990 392 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 AC024581.2-201ENST00000619986 252 ntBASIC3.29□□□□□ -1.88
SNRPA1P09661 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNRPA1P09661 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRPA1P09661 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SNRPA1P09661 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 1163.2 ms