Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 AC016700.2-201ENST00000446011 156 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 SRRM1P2-201ENST00000464531 1192 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.3□□□□□ -2.36
CXCL1P09341 AC015911.1-201ENST00000495111 156 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AC113410.1-201ENST00000505029 247 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CXCL1P09341 AC108729.3-201ENST00000513484 108 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 RNU7-51P-201ENST00000516560 62 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 RNA5SP102-201ENST00000516865 106 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 RNU6-201P-201ENST00000517100 61 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AC021231.3-201ENST00000558497 370 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 TPRKBP2-201ENST00000565969 475 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 MIR4498-201ENST00000577599 66 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.3□□□□□ -2.36
CXCL1P09341 AL031281.1-201ENST00000604049 488 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AL356157.2-201ENST00000605122 111 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AL139286.2-201ENST00000606838 396 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.3□□□□□ -2.36
CXCL1P09341 AP002782.1-201ENST00000623107 614 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 BX322639.1-202ENST00000423987 2213 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 AC092268.1-201ENST00000342691 405 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 MIR96-201ENST00000362288 78 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNY1P10-201ENST00000363268 113 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNU1-93P-201ENST00000364704 169 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNU6-877P-201ENST00000383868 107 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNU6-1031P-201ENST00000384773 107 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 EEF1A1P40-201ENST00000412883 573 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.29□□□□□ -2.36
CXCL1P09341 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCL1P09341 AL353777.1-201ENST00000425552 326 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 AL035398.1-201ENST00000430869 322 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCL1P09341 MTND1P12-201ENST00000455231 147 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 AC024995.1-201ENST00000523014 93 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 ZNF321P-202ENST00000550843 495 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCL1P09341 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.29□□□□□ -2.36
CXCL1P09341 MIR6715A-201ENST00000615929 79 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 AC136475.10-201ENST00000620253 385 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 AC097372.5-201ENST00000623665 376 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 Z69720.2-201ENST00000624755 279 ntBASIC0.29□□□□□ -2.36
CXCL1P09341 RNA5SP499-201ENST00000363982 119 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 RPL21P1-201ENST00000399532 476 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.28□□□□□ -2.36
CXCL1P09341 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.28□□□□□ -2.36
CXCL1P09341 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.28□□□□□ -2.36
CXCL1P09341 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.28□□□□□ -2.36
CXCL1P09341 AC010975.2-201ENST00000427781 588 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 FABP5P4-201ENST00000437203 171 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AC104982.1-201ENST00000478775 574 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 RPS23P5-201ENST00000495419 428 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AC112206.4-201ENST00000515142 405 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.28□□□□□ -2.36
CXCL1P09341 RNU6-1003P-201ENST00000517099 105 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.28□□□□□ -2.36
CXCL1P09341 AC013828.2-201ENST00000532487 235 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.28□□□□□ -2.36
CXCL1P09341 MIR5692A1-201ENST00000580523 69 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AL929325.1-201ENST00000603096 117 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AL158032.1-201ENST00000605401 106 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 AL121895.2-201ENST00000619558 447 ntBASIC0.28□□□□□ -2.36
CXCL1P09341 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.28□□□□□ -2.37
CXCL1P09341 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CXCL1P09341 RNA5SP347-201ENST00000362445 119 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 snoU2-30.2-201ENST00000362805 70 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 U3.4-201ENST00000363352 213 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 RNU6-945P-201ENST00000383947 107 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 RNU6-505P-201ENST00000384427 107 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CXCL1P09341 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CXCL1P09341 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.27□□□□□ -2.37
CXCL1P09341 BTBD7P2-201ENST00000441962 620 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCL1P09341 SNRPFP3-201ENST00000457792 225 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 RNU7-21P-201ENST00000459430 62 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.27□□□□□ -2.37
CXCL1P09341 AC007834.2-201ENST00000536310 343 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AC123904.2-201ENST00000548059 300 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCL1P09341 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCL1P09341 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCL1P09341 AC104984.5-201ENST00000586878 94 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AL512605.2-201ENST00000592972 256 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AC016727.2-201ENST00000603988 621 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AC012557.2-201ENST00000605919 418 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.27□□□□□ -2.37
CXCL1P09341 CASC19-280ENST00000642102 1351 ntBASIC0.27□□□□□ -2.37
CXCL1P09341 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 RNU6-433P-201ENST00000363216 104 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 RNU6-163P-201ENST00000384396 106 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 MIR653-201ENST00000385279 96 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms