Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD32A-201ENST00000364805 84 ntBASIC2.68□□□□□ -1.98
MMP3P08254 SNORD21-201ENST00000383953 95 ntBASIC2.68□□□□□ -1.98
MMP3P08254 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
MMP3P08254 Y_RNA.445-201ENST00000384168 102 ntBASIC2.68□□□□□ -1.98
MMP3P08254 MIR559-201ENST00000385188 96 ntBASIC2.68□□□□□ -1.98
MMP3P08254 BTF3L4P2-201ENST00000392798 346 ntBASIC2.68□□□□□ -1.98
MMP3P08254 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
MMP3P08254 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
MMP3P08254 AC138623.1-201ENST00000418060 216 ntBASIC2.68□□□□□ -1.98
MMP3P08254 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.68□□□□□ -1.98
MMP3P08254 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.68□□□□□ -1.98
MMP3P08254 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.68□□□□□ -1.98
MMP3P08254 Z98742.2-201ENST00000431564 187 ntBASIC2.68□□□□□ -1.98
MMP3P08254 AC022447.4-201ENST00000504053 364 ntBASIC2.68□□□□□ -1.98
MMP3P08254 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
MMP3P08254 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.68□□□□□ -1.98
MMP3P08254 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
MMP3P08254 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.68□□□□□ -1.98
MMP3P08254 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.68□□□□□ -1.98
MMP3P08254 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.68□□□□□ -1.98
MMP3P08254 AC008739.2-201ENST00000597006 317 ntBASIC2.68□□□□□ -1.98
MMP3P08254 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.68□□□□□ -1.98
MMP3P08254 AC009318.2-201ENST00000610917 651 ntBASIC2.68□□□□□ -1.98
MMP3P08254 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
MMP3P08254 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MMP3P08254 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
MMP3P08254 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MMP3P08254 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
MMP3P08254 MTND5P30-201ENST00000452896 1731 ntBASIC2.68□□□□□ -1.98
MMP3P08254 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MMP3P08254 MTND5P9-201ENST00000503854 1755 ntBASIC2.67□□□□□ -1.98
MMP3P08254 RNU6-212P-201ENST00000362642 104 ntBASIC2.67□□□□□ -1.98
MMP3P08254 SNORA36A-201ENST00000384221 132 ntBASIC2.67□□□□□ -1.98
MMP3P08254 Y_RNA.504-201ENST00000384481 104 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AL591034.2-201ENST00000402839 359 ntBASIC2.67□□□□□ -1.98
MMP3P08254 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.67□□□□□ -1.98
MMP3P08254 RPL39P29-201ENST00000447779 157 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC079354.2-201ENST00000453523 154 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.67□□□□□ -1.98
MMP3P08254 Y_RNA.639-201ENST00000458981 102 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC112771.1-201ENST00000463581 102 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.67□□□□□ -1.98
MMP3P08254 AC114801.2-201ENST00000503825 781 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.67□□□□□ -1.98
MMP3P08254 Y_RNA.661-201ENST00000516003 99 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AC020661.2-201ENST00000560114 134 ntBASIC2.67□□□□□ -1.98
MMP3P08254 RPS15AP11-201ENST00000594193 385 ntBASIC2.67□□□□□ -1.98
MMP3P08254 VN1R107P-201ENST00000601784 209 ntBASIC2.67□□□□□ -1.98
MMP3P08254 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.67□□□□□ -1.98
MMP3P08254 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.67□□□□□ -1.98
MMP3P08254 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
MMP3P08254 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MMP3P08254 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MMP3P08254 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MMP3P08254 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
MMP3P08254 RNU6-1115P-201ENST00000362490 106 ntBASIC2.66□□□□□ -1.98
MMP3P08254 Y_RNA.197-201ENST00000364004 102 ntBASIC2.66□□□□□ -1.98
MMP3P08254 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.66□□□□□ -1.98
MMP3P08254 MRPS18CP6-201ENST00000423587 223 ntBASIC2.66□□□□□ -1.98
MMP3P08254 MTCO3P29-201ENST00000432119 779 ntBASIC2.66□□□□□ -1.98
MMP3P08254 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.66□□□□□ -1.98
MMP3P08254 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.66□□□□□ -1.98
MMP3P08254 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.66□□□□□ -1.98
MMP3P08254 AC105758.1-201ENST00000506038 399 ntBASIC2.66□□□□□ -1.98
MMP3P08254 RNU6-470P-201ENST00000515954 104 ntBASIC2.66□□□□□ -1.98
MMP3P08254 RNU6-699P-201ENST00000517081 110 ntBASIC2.66□□□□□ -1.98
MMP3P08254 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.66□□□□□ -1.98
MMP3P08254 AP003072.1-201ENST00000531740 145 ntBASIC2.66□□□□□ -1.98
MMP3P08254 HSPE1P4-201ENST00000550617 308 ntBASIC2.66□□□□□ -1.98
MMP3P08254 MIR3171-201ENST00000584270 74 ntBASIC2.66□□□□□ -1.98
MMP3P08254 SNORA43.4-201ENST00000629559 138 ntBASIC2.66□□□□□ -1.98
MMP3P08254 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MMP3P08254 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.66□□□□□ -1.98
MMP3P08254 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MMP3P08254 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.66□□□□□ -1.98
MMP3P08254 Y_RNA.5-201ENST00000362334 102 ntBASIC2.65□□□□□ -1.99
MMP3P08254 Y_RNA.40-201ENST00000362645 93 ntBASIC2.65□□□□□ -1.99
MMP3P08254 RNU6-99P-201ENST00000364721 107 ntBASIC2.65□□□□□ -1.99
MMP3P08254 RNU6-596P-201ENST00000365395 98 ntBASIC2.65□□□□□ -1.99
MMP3P08254 RNU6-1227P-201ENST00000383981 107 ntBASIC2.65□□□□□ -1.99
MMP3P08254 Y_RNA.463-201ENST00000384271 102 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MIR1302-11-201ENST00000408051 138 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MIR548P-201ENST00000408336 84 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MIR1302-9-201ENST00000408365 138 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MIR1302-10-201ENST00000408734 138 ntBASIC2.65□□□□□ -1.99
MMP3P08254 AC005534.2-201ENST00000431047 433 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MTCYBP6-201ENST00000441810 138 ntBASIC2.65□□□□□ -1.99
MMP3P08254 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.65□□□□□ -1.99
MMP3P08254 snoU13.23-201ENST00000458863 104 ntBASIC2.65□□□□□ -1.99
MMP3P08254 RPL30P1-201ENST00000488676 339 ntBASIC2.65□□□□□ -1.99
MMP3P08254 SEM1P1-201ENST00000506694 209 ntBASIC2.65□□□□□ -1.99
MMP3P08254 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.65□□□□□ -1.99
MMP3P08254 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MIR1273D-201ENST00000577266 86 ntBASIC2.65□□□□□ -1.99
MMP3P08254 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.65□□□□□ -1.99
MMP3P08254 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.65□□□□□ -1.99
MMP3P08254 MIR1302-2-201ENST00000607096 138 ntBASIC2.65□□□□□ -1.99
MMP3P08254 AL359198.2-201ENST00000611836 194 ntBASIC2.65□□□□□ -1.99
MMP3P08254 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.65□□□□□ -1.99
MMP3P08254 uc_338.22-201ENST00000622722 187 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms