Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 7SK.13-201ENST00000622040 250 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AL049777.1-201ENST00000622740 518 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU1-76P-201ENST00000362903 159 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 U3.4-201ENST00000363352 213 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 U3.9-201ENST00000363823 204 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU6-336P-201ENST00000364891 107 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AL356776.1-201ENST00000406574 447 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 Y_RNA.608-201ENST00000410647 95 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AC078809.1-201ENST00000427601 140 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 PRPS1P1-201ENST00000445305 876 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 MTATP6P14-201ENST00000455189 673 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU7-14P-201ENST00000459331 62 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AC074344.1-201ENST00000512823 224 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU6-377P-201ENST00000515965 102 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU6-1041P-201ENST00000516254 102 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU6-856P-201ENST00000516959 98 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 MIR3923-201ENST00000579521 83 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 HMGN1P30-201ENST00000589286 268 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AL359999.1-201ENST00000604513 294 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AC018714.1-201ENST00000605028 208 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AL022345.2-201ENST00000606307 135 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 BX284668.6-201ENST00000606899 438 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 AL353149.1-201ENST00000610667 244 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
HLA-DQB2P05538 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
HLA-DQB2P05538 RNU6-37P-201ENST00000362692 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-11P-201ENST00000364234 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU4-56P-201ENST00000364700 142 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 SNORA25.9-201ENST00000365087 128 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-25P-201ENST00000383873 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-1-201ENST00000383898 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-48P-201ENST00000384161 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-36P-201ENST00000384172 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-4P-201ENST00000384205 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-5P-201ENST00000384238 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-3P-201ENST00000384314 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-16P-201ENST00000384385 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-45P-201ENST00000384471 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-15P-201ENST00000384534 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-2-201ENST00000384627 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-29P-201ENST00000384637 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-9-201ENST00000384776 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-33P-201ENST00000384793 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 MIR122-201ENST00000385044 85 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 ELOCP4-201ENST00000420090 333 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 USP9YP14-201ENST00000430663 563 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC013470.1-201ENST00000453438 462 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU5F-4P-201ENST00000516581 114 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AL442163.3-201ENST00000554110 156 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.73□□□□□ -2.29
HLA-DQB2P05538 MTATP6P3-201ENST00000581686 676 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC078795.3-201ENST00000602913 472 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC105129.3-201ENST00000605455 485 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 RNU6-6P-201ENST00000606623 107 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AL450472.1-202ENST00000637286 180 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC068647.2-201ENST00000637380 353 ntBASIC0.73□□□□□ -2.29
HLA-DQB2P05538 AC009541.1-201ENST00000438279 2662 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 RNU6-179P-201ENST00000363350 107 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 Y_RNA.324-201ENST00000365165 102 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 SNORA4.2-201ENST00000365313 147 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 RNU6-1200P-201ENST00000384162 107 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 RNU6-906P-201ENST00000384700 70 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 Y_RNA.576-201ENST00000384781 102 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 RPL23AP95-201ENST00000426806 265 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 MTATP6P16-201ENST00000434543 526 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC073910.1-201ENST00000445047 438 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AL163973.1-201ENST00000484753 577 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC091951.3-201ENST00000504093 246 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC023050.3-201ENST00000541142 333 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 EIF4A1P12-201ENST00000551910 141 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC090888.2-201ENST00000559765 1144 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC107304.1-201ENST00000604229 296 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AL121992.2-201ENST00000606262 256 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC138749.5-201ENST00000611461 208 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC040896.1-201ENST00000613819 479 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC116165.2-201ENST00000616705 206 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC008147.4-201ENST00000617570 1204 ntBASIC0.72□□□□□ -2.29
HLA-DQB2P05538 AC092268.1-201ENST00000342691 405 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 Y_RNA.191-201ENST00000363972 113 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RNA5SP259-201ENST00000365541 109 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RNU6-378P-201ENST00000384324 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms