Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC103706.2-201ENST00000638080 240 ntBASIC0.12□□□□□ -2.39
TCRAP04437 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
TCRAP04437 MTND4P5-201ENST00000435821 1374 ntBASIC0.11□□□□□ -2.39
TCRAP04437 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
TCRAP04437 Y_RNA.132-201ENST00000363421 102 ntBASIC0.11□□□□□ -2.39
TCRAP04437 RNU6-1335P-201ENST00000365426 107 ntBASIC0.11□□□□□ -2.39
TCRAP04437 RNU5E-6P-201ENST00000365574 115 ntBASIC0.11□□□□□ -2.39
TCRAP04437 MIR216A-201ENST00000385063 110 ntBASIC0.11□□□□□ -2.39
TCRAP04437 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRAP04437 ELOCP17-201ENST00000414751 326 ntBASIC0.11□□□□□ -2.39
TCRAP04437 HIGD1AP15-201ENST00000416198 280 ntBASIC0.11□□□□□ -2.39
TCRAP04437 VPS26BP1-201ENST00000417155 755 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRAP04437 AL355994.1-201ENST00000424379 260 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AL353718.1-201ENST00000451028 517 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRAP04437 MTND2P3-201ENST00000452458 470 ntBASIC0.11□□□□□ -2.39
TCRAP04437 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRAP04437 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
TCRAP04437 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TCRAP04437 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
TCRAP04437 RNU5F-4P-201ENST00000516581 114 ntBASIC0.11□□□□□ -2.39
TCRAP04437 MIR548AC-201ENST00000585049 88 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AC026585.1-201ENST00000619582 524 ntBASIC0.11□□□□□ -2.39
TCRAP04437 Z69720.2-201ENST00000624755 279 ntBASIC0.11□□□□□ -2.39
TCRAP04437 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.11□□□□□ -2.39
TCRAP04437 MIRLET7D-201ENST00000362263 87 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RNU1-76P-201ENST00000362903 159 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RNU6-511P-201ENST00000363496 107 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RNU6-960P-201ENST00000364056 120 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RNU6-1026P-201ENST00000384465 108 ntBASIC0.1□□□□□ -2.39
TCRAP04437 UBE2D3P3-201ENST00000426992 425 ntBASIC0.1□□□□□ -2.39
TCRAP04437 RSL24D1P8-201ENST00000434442 492 ntBASIC0.1□□□□□ -2.39
TCRAP04437 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
TCRAP04437 U7.7-201ENST00000459276 60 ntBASIC0.1□□□□□ -2.39
TCRAP04437 SNORA70.12-201ENST00000516084 153 ntBASIC0.1□□□□□ -2.39
TCRAP04437 OR8K2P-201ENST00000524645 927 ntBASIC0.1□□□□□ -2.39
TCRAP04437 AC021231.3-201ENST00000558497 370 ntBASIC0.1□□□□□ -2.39
TCRAP04437 AC008752.3-201ENST00000588113 712 ntBASIC0.1□□□□□ -2.39
TCRAP04437 AC017083.3-201ENST00000609955 700 ntBASIC0.1□□□□□ -2.39
TCRAP04437 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.1□□□□□ -2.39
TCRAP04437 AL354696.1-201ENST00000614652 497 ntBASIC0.1□□□□□ -2.39
TCRAP04437 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
TCRAP04437 AC092268.1-201ENST00000342691 405 ntBASIC0.09□□□□□ -2.4
TCRAP04437 U3.9-201ENST00000363823 204 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RNU6-621P-201ENST00000364752 109 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RNU6-877P-201ENST00000383868 107 ntBASIC0.09□□□□□ -2.4
TCRAP04437 SNORD116-13-201ENST00000384408 92 ntBASIC0.09□□□□□ -2.4
TCRAP04437 MIR653-201ENST00000385279 96 ntBASIC0.09□□□□□ -2.4
TCRAP04437 SNORD41-201ENST00000386967 70 ntBASIC0.09□□□□□ -2.4
TCRAP04437 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RPS20P2-201ENST00000402520 389 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RNU2-62P-201ENST00000410868 191 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRAP04437 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRAP04437 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.09□□□□□ -2.4
TCRAP04437 AC007547.1-201ENST00000462177 490 ntBASIC0.09□□□□□ -2.4
TCRAP04437 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.09□□□□□ -2.4
TCRAP04437 AL049830.1-201ENST00000468034 425 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AC109445.1-201ENST00000512356 383 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RNA5SP216-201ENST00000516111 123 ntBASIC0.09□□□□□ -2.4
TCRAP04437 RNU2-34P-201ENST00000516534 121 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AC016957.1-201ENST00000534895 309 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRAP04437 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AL359547.2-201ENST00000615810 418 ntBASIC0.09□□□□□ -2.4
TCRAP04437 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRAP04437 AC006927.4-201ENST00000639187 543 ntBASIC0.09□□□□□ -2.4
TCRAP04437 AL589743.1-201ENST00000551932 2712 ntBASIC0.09□□□□□ -2.4
TCRAP04437 BX322639.1-202ENST00000423987 2213 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU4-56P-201ENST00000364700 142 ntBASIC0.08□□□□□ -2.4
TCRAP04437 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-1-201ENST00000383898 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-42P-201ENST00000384165 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-36P-201ENST00000384172 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-4P-201ENST00000384205 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-5P-201ENST00000384238 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-3P-201ENST00000384314 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-2-201ENST00000384627 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-1179P-201ENST00000384667 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-9-201ENST00000384776 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNU6-33P-201ENST00000384793 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AL603865.2-201ENST00000401679 213 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RNA5SP193-201ENST00000410353 107 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RPL22P18-201ENST00000417197 377 ntBASIC0.08□□□□□ -2.4
TCRAP04437 C1DP2-201ENST00000418167 426 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRAP04437 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.08□□□□□ -2.4
TCRAP04437 RPL23AP30-201ENST00000432419 501 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AL445305.1-201ENST00000432577 575 ntBASIC0.08□□□□□ -2.4
TCRAP04437 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRAP04437 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRAP04437 C1DP4-201ENST00000455429 424 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AC022364.2-201ENST00000457963 554 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AP000797.1-201ENST00000478870 387 ntBASIC0.08□□□□□ -2.4
TCRAP04437 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRAP04437 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms