Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL356432.1-201ENST00000405809 419 ntBASIC2.24□□□□□ -2.05
VTNP04004 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
VTNP04004 RNA5SP390-201ENST00000410191 113 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC074085.1-201ENST00000413598 418 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.24□□□□□ -2.05
VTNP04004 AC027124.2-201ENST00000428249 105 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC007969.2-201ENST00000441891 191 ntBASIC2.24□□□□□ -2.05
VTNP04004 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.24□□□□□ -2.05
VTNP04004 AC107399.1-201ENST00000451226 265 ntBASIC2.24□□□□□ -2.05
VTNP04004 MTND4P17-201ENST00000470444 350 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.24□□□□□ -2.05
VTNP04004 RNU6-875P-201ENST00000516488 106 ntBASIC2.24□□□□□ -2.05
VTNP04004 RNU1-54P-201ENST00000517181 120 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.24□□□□□ -2.05
VTNP04004 AC015712.3-201ENST00000559380 164 ntBASIC2.24□□□□□ -2.05
VTNP04004 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC090897.2-201ENST00000581715 130 ntBASIC2.24□□□□□ -2.05
VTNP04004 BNIP3P16-201ENST00000589779 534 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
VTNP04004 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.24□□□□□ -2.05
VTNP04004 AC009994.1-201ENST00000606889 253 ntBASIC2.24□□□□□ -2.05
VTNP04004 RNU6-91P-201ENST00000607774 107 ntBASIC2.24□□□□□ -2.05
VTNP04004 AC007792.1-201ENST00000623023 402 ntBASIC2.24□□□□□ -2.05
VTNP04004 HAUS6P2-201ENST00000433254 2404 ntBASIC2.24□□□□□ -2.05
VTNP04004 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VTNP04004 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.24□□□□□ -2.05
VTNP04004 AC092881.1-201ENST00000638218 2733 ntBASIC2.23□□□□□ -2.05
VTNP04004 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
VTNP04004 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
VTNP04004 Y_RNA.135-201ENST00000363439 95 ntBASIC2.23□□□□□ -2.05
VTNP04004 SNORA80E-201ENST00000384744 137 ntBASIC2.23□□□□□ -2.05
VTNP04004 MIR517A-201ENST00000385001 87 ntBASIC2.23□□□□□ -2.05
VTNP04004 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VTNP04004 RNU6-1009P-201ENST00000390996 107 ntBASIC2.23□□□□□ -2.05
VTNP04004 AL645568.3-201ENST00000433683 316 ntBASIC2.23□□□□□ -2.05
VTNP04004 RPS3AP52-201ENST00000435639 297 ntBASIC2.23□□□□□ -2.05
VTNP04004 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.23□□□□□ -2.05
VTNP04004 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.23□□□□□ -2.05
VTNP04004 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.23□□□□□ -2.05
VTNP04004 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.23□□□□□ -2.05
VTNP04004 AC073901.1-201ENST00000462471 408 ntBASIC2.23□□□□□ -2.05
VTNP04004 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
VTNP04004 AC108210.2-201ENST00000503681 201 ntBASIC2.23□□□□□ -2.05
VTNP04004 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.23□□□□□ -2.05
VTNP04004 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.23□□□□□ -2.05
VTNP04004 AP005902.1-201ENST00000521358 186 ntBASIC2.23□□□□□ -2.05
VTNP04004 AC079598.5-201ENST00000547460 117 ntBASIC2.23□□□□□ -2.05
VTNP04004 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
VTNP04004 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
VTNP04004 AC073410.2-201ENST00000603240 332 ntBASIC2.23□□□□□ -2.05
VTNP04004 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
VTNP04004 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VTNP04004 AC009541.1-201ENST00000438279 2662 ntBASIC2.22□□□□□ -2.05
VTNP04004 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VTNP04004 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
VTNP04004 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
VTNP04004 RNA5SP125-201ENST00000364843 120 ntBASIC2.22□□□□□ -2.05
VTNP04004 RNU6-867P-201ENST00000364956 107 ntBASIC2.22□□□□□ -2.05
VTNP04004 BTF3L4P2-201ENST00000392798 346 ntBASIC2.22□□□□□ -2.05
VTNP04004 RPL37P10-201ENST00000412884 288 ntBASIC2.22□□□□□ -2.05
VTNP04004 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.22□□□□□ -2.05
VTNP04004 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
VTNP04004 MTND5P5-201ENST00000503764 376 ntBASIC2.22□□□□□ -2.05
VTNP04004 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.22□□□□□ -2.05
VTNP04004 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
VTNP04004 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.22□□□□□ -2.05
VTNP04004 HSPE1P4-201ENST00000550617 308 ntBASIC2.22□□□□□ -2.05
VTNP04004 AC007375.1-201ENST00000554513 578 ntBASIC2.22□□□□□ -2.05
VTNP04004 AL161423.1-201ENST00000613700 262 ntBASIC2.22□□□□□ -2.05
VTNP04004 AL008636.1-201ENST00000625038 1018 ntBASIC2.22□□□□□ -2.05
VTNP04004 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.21□□□□□ -2.06
VTNP04004 Y_RNA.123-201ENST00000363338 102 ntBASIC2.21□□□□□ -2.06
VTNP04004 Y_RNA.166-201ENST00000363730 102 ntBASIC2.21□□□□□ -2.06
VTNP04004 RNU5E-4P-201ENST00000364931 120 ntBASIC2.21□□□□□ -2.06
VTNP04004 RNU6-487P-201ENST00000365430 104 ntBASIC2.21□□□□□ -2.06
VTNP04004 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
VTNP04004 RNU6-43P-201ENST00000384302 107 ntBASIC2.21□□□□□ -2.06
VTNP04004 Y_RNA.473-201ENST00000384333 102 ntBASIC2.21□□□□□ -2.06
VTNP04004 Y_RNA.504-201ENST00000384481 104 ntBASIC2.21□□□□□ -2.06
VTNP04004 RNU6-1222P-201ENST00000384615 107 ntBASIC2.21□□□□□ -2.06
VTNP04004 MIR186-201ENST00000384988 86 ntBASIC2.21□□□□□ -2.06
VTNP04004 U8.13-201ENST00000390842 128 ntBASIC2.21□□□□□ -2.06
VTNP04004 MIR548K-201ENST00000408406 116 ntBASIC2.21□□□□□ -2.06
VTNP04004 RNU6-1304P-201ENST00000411374 106 ntBASIC2.21□□□□□ -2.06
VTNP04004 MTND1P17-201ENST00000448961 204 ntBASIC2.21□□□□□ -2.06
VTNP04004 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
VTNP04004 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.21□□□□□ -2.06
VTNP04004 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
VTNP04004 RNU6-237P-201ENST00000515985 71 ntBASIC2.21□□□□□ -2.06
VTNP04004 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.21□□□□□ -2.06
VTNP04004 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.21□□□□□ -2.06
VTNP04004 POLR3GP2-201ENST00000588366 668 ntBASIC2.21□□□□□ -2.06
VTNP04004 AP001836.1-201ENST00000604675 523 ntBASIC2.21□□□□□ -2.06
VTNP04004 AC124303.1-201ENST00000605703 360 ntBASIC2.21□□□□□ -2.06
VTNP04004 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
VTNP04004 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VTNP04004 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VTNP04004 RNU6-1010P-201ENST00000362757 107 ntBASIC2.2□□□□□ -2.06
VTNP04004 RNU6-227P-201ENST00000362865 103 ntBASIC2.2□□□□□ -2.06
VTNP04004 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms