Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RNU6-278P-201ENST00000390945 109 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 AL445305.1-201ENST00000432577 575 ntBASIC0.1□□□□□ -2.39
APOC1P02654 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.1□□□□□ -2.39
APOC1P02654 AL117351.1-201ENST00000438864 766 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.1□□□□□ -2.39
APOC1P02654 MTND5P2-201ENST00000442927 1142 ntBASIC0.1□□□□□ -2.39
APOC1P02654 snoU13.25-201ENST00000458945 104 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AP000797.1-201ENST00000478870 387 ntBASIC0.1□□□□□ -2.39
APOC1P02654 RN7SKP12-201ENST00000516275 143 ntBASIC0.1□□□□□ -2.39
APOC1P02654 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.1□□□□□ -2.39
APOC1P02654 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.1□□□□□ -2.39
APOC1P02654 AL390123.1-201ENST00000603216 237 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AL513534.2-201ENST00000603836 250 ntBASIC0.1□□□□□ -2.39
APOC1P02654 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
APOC1P02654 AP002802.2-201ENST00000605877 235 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AL353149.1-201ENST00000610667 244 ntBASIC0.1□□□□□ -2.39
APOC1P02654 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.1□□□□□ -2.39
APOC1P02654 AL138955.1-201ENST00000622881 1040 ntBASIC0.1□□□□□ -2.39
APOC1P02654 RNU6-37P-201ENST00000362692 107 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNU6-11P-201ENST00000364234 107 ntBASIC0.09□□□□□ -2.4
APOC1P02654 Y_RNA.354-201ENST00000365448 111 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNU6-418P-201ENST00000384035 107 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNU6-190P-201ENST00000384154 102 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNU6-1031P-201ENST00000384773 107 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
APOC1P02654 MTCYBP2-201ENST00000407745 171 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.09□□□□□ -2.4
APOC1P02654 MTND4P20-201ENST00000424125 869 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.09□□□□□ -2.4
APOC1P02654 AC244098.3-201ENST00000424803 96 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.09□□□□□ -2.4
APOC1P02654 UBE2D3P3-201ENST00000426992 425 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.09□□□□□ -2.4
APOC1P02654 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.09□□□□□ -2.4
APOC1P02654 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.09□□□□□ -2.4
APOC1P02654 PAXBP1P1-201ENST00000449315 447 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AL353718.1-201ENST00000451028 517 ntBASIC0.09□□□□□ -2.4
APOC1P02654 MTND2P3-201ENST00000452458 470 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
APOC1P02654 AL162395.1-201ENST00000457882 422 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AC022493.2-201ENST00000506122 481 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
APOC1P02654 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
APOC1P02654 RNU1-86P-201ENST00000516108 154 ntBASIC0.09□□□□□ -2.4
APOC1P02654 RNU1-107P-201ENST00000516617 154 ntBASIC0.09□□□□□ -2.4
APOC1P02654 MTND2P7-201ENST00000521337 640 ntBASIC0.09□□□□□ -2.4
APOC1P02654 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.4
APOC1P02654 HMGN1P30-201ENST00000589286 268 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AC112191.3-201ENST00000604371 277 ntBASIC0.09□□□□□ -2.4
APOC1P02654 AC022709.1-201ENST00000615967 87 ntBASIC0.09□□□□□ -2.4
APOC1P02654 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.09□□□□□ -2.4
APOC1P02654 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
APOC1P02654 Y_RNA.116-201ENST00000363292 103 ntBASIC0.08□□□□□ -2.4
APOC1P02654 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.08□□□□□ -2.4
APOC1P02654 SNORD116-13-201ENST00000384408 92 ntBASIC0.08□□□□□ -2.4
APOC1P02654 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
APOC1P02654 MIR1287-201ENST00000408492 90 ntBASIC0.08□□□□□ -2.4
APOC1P02654 RNA5SP201-201ENST00000410316 124 ntBASIC0.08□□□□□ -2.4
APOC1P02654 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.08□□□□□ -2.4
APOC1P02654 TIMM9P3-201ENST00000428659 274 ntBASIC0.08□□□□□ -2.4
APOC1P02654 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
APOC1P02654 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.08□□□□□ -2.4
APOC1P02654 Z98751.3-201ENST00000604447 521 ntBASIC0.08□□□□□ -2.4
APOC1P02654 AC064872.1-201ENST00000604823 1072 ntBASIC0.08□□□□□ -2.4
APOC1P02654 AL360219.1-201ENST00000610230 366 ntBASIC0.08□□□□□ -2.4
APOC1P02654 AC078880.5-201ENST00000617845 421 ntBASIC0.08□□□□□ -2.4
APOC1P02654 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
APOC1P02654 SNORD114-23-201ENST00000363536 72 ntBASIC0.07□□□□□ -2.4
APOC1P02654 RNU6-950P-201ENST00000384651 107 ntBASIC0.07□□□□□ -2.4
APOC1P02654 MIR518E-201ENST00000385252 88 ntBASIC0.07□□□□□ -2.4
APOC1P02654 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
APOC1P02654 MIR1284-201ENST00000408337 120 ntBASIC0.07□□□□□ -2.4
APOC1P02654 RNA5SP511-201ENST00000410487 115 ntBASIC0.07□□□□□ -2.4
APOC1P02654 MTCYBP39-201ENST00000437562 491 ntBASIC0.07□□□□□ -2.4
APOC1P02654 AC007395.1-201ENST00000451333 677 ntBASIC0.07□□□□□ -2.4
APOC1P02654 MTCYBP1-201ENST00000454315 1119 ntBASIC0.07□□□□□ -2.4
APOC1P02654 RNU7-90P-201ENST00000459216 62 ntBASIC0.07□□□□□ -2.4
APOC1P02654 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.07□□□□□ -2.4
APOC1P02654 HMGB1P29-201ENST00000505659 499 ntBASIC0.07□□□□□ -2.4
APOC1P02654 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.07□□□□□ -2.4
APOC1P02654 VN1R87P-201ENST00000596706 487 ntBASIC0.07□□□□□ -2.4
APOC1P02654 AL606834.3-201ENST00000602615 496 ntBASIC0.07□□□□□ -2.4
APOC1P02654 PRELID3BP2-201ENST00000605362 201 ntBASIC0.07□□□□□ -2.4
APOC1P02654 AC012557.2-201ENST00000605919 418 ntBASIC0.07□□□□□ -2.4
APOC1P02654 RMST_2.1-201ENST00000617263 136 ntBASIC0.07□□□□□ -2.4
APOC1P02654 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.07□□□□□ -2.4
APOC1P02654 7SK.10-201ENST00000621414 298 ntBASIC0.07□□□□□ -2.4
APOC1P02654 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.07□□□□□ -2.4
APOC1P02654 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
APOC1P02654 RNU6-511P-201ENST00000363496 107 ntBASIC0.06□□□□□ -2.4
APOC1P02654 Y_RNA.226-201ENST00000364337 114 ntBASIC0.06□□□□□ -2.4
APOC1P02654 RNU5E-6P-201ENST00000365574 115 ntBASIC0.06□□□□□ -2.4
APOC1P02654 RNU6-142P-201ENST00000384019 107 ntBASIC0.06□□□□□ -2.4
APOC1P02654 RNU6-1179P-201ENST00000384667 107 ntBASIC0.06□□□□□ -2.4
APOC1P02654 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms