Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR518E-201ENST00000385252 88 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU2-3P-201ENST00000410144 191 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU6-757P-201ENST00000410334 100 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU6-1245P-201ENST00000411130 106 ntBASIC0.71□□□□□ -2.3
APOEP02649 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
APOEP02649 AC010975.2-201ENST00000427781 588 ntBASIC0.71□□□□□ -2.3
APOEP02649 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
APOEP02649 AC244670.1-201ENST00000436879 112 ntBASIC0.71□□□□□ -2.3
APOEP02649 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.71□□□□□ -2.3
APOEP02649 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.71□□□□□ -2.3
APOEP02649 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
APOEP02649 AL163973.1-201ENST00000484753 577 ntBASIC0.71□□□□□ -2.3
APOEP02649 AC116347.2-201ENST00000514912 523 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU5F-4P-201ENST00000516581 114 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU6-197P-201ENST00000516680 100 ntBASIC0.71□□□□□ -2.3
APOEP02649 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.71□□□□□ -2.3
APOEP02649 AC008521.1-201ENST00000587471 187 ntBASIC0.71□□□□□ -2.3
APOEP02649 RNU6-877P-201ENST00000383868 107 ntBASIC0.7□□□□□ -2.3
APOEP02649 RNY1P14-201ENST00000384426 108 ntBASIC0.7□□□□□ -2.3
APOEP02649 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
APOEP02649 RNU6-293P-201ENST00000411259 106 ntBASIC0.7□□□□□ -2.3
APOEP02649 HIGD1AP15-201ENST00000416198 280 ntBASIC0.7□□□□□ -2.3
APOEP02649 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.7□□□□□ -2.3
APOEP02649 RPL22P17-201ENST00000438729 315 ntBASIC0.7□□□□□ -2.3
APOEP02649 AC069257.2-201ENST00000441819 155 ntBASIC0.7□□□□□ -2.3
APOEP02649 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.7□□□□□ -2.3
APOEP02649 AC007395.1-201ENST00000451333 677 ntBASIC0.7□□□□□ -2.3
APOEP02649 RNU7-34P-201ENST00000459394 64 ntBASIC0.7□□□□□ -2.3
APOEP02649 SUMO2P16-201ENST00000519475 264 ntBASIC0.7□□□□□ -2.3
APOEP02649 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.7□□□□□ -2.3
APOEP02649 MIR5692A1-201ENST00000580523 69 ntBASIC0.7□□□□□ -2.3
APOEP02649 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.7□□□□□ -2.3
APOEP02649 MIR6734-201ENST00000621166 68 ntBASIC0.7□□□□□ -2.3
APOEP02649 Z69720.2-201ENST00000624755 279 ntBASIC0.7□□□□□ -2.3
APOEP02649 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
APOEP02649 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
APOEP02649 Y_RNA.97-201ENST00000363094 102 ntBASIC0.69□□□□□ -2.3
APOEP02649 U3.9-201ENST00000363823 204 ntBASIC0.69□□□□□ -2.3
APOEP02649 RNU6-809P-201ENST00000384461 107 ntBASIC0.69□□□□□ -2.3
APOEP02649 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.69□□□□□ -2.3
APOEP02649 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
APOEP02649 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.69□□□□□ -2.3
APOEP02649 AC060773.1-201ENST00000421698 310 ntBASIC0.69□□□□□ -2.3
APOEP02649 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.69□□□□□ -2.3
APOEP02649 NDUFA5P4-201ENST00000436704 385 ntBASIC0.69□□□□□ -2.3
APOEP02649 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.69□□□□□ -2.3
APOEP02649 MTND2P31-201ENST00000512602 616 ntBASIC0.69□□□□□ -2.3
APOEP02649 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.69□□□□□ -2.3
APOEP02649 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.69□□□□□ -2.3
APOEP02649 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.69□□□□□ -2.3
APOEP02649 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.69□□□□□ -2.3
APOEP02649 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
APOEP02649 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
APOEP02649 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.69□□□□□ -2.3
APOEP02649 BNIP3P40-201ENST00000596017 556 ntBASIC0.69□□□□□ -2.3
APOEP02649 AC112187.2-201ENST00000604345 283 ntBASIC0.69□□□□□ -2.3
APOEP02649 PCGEM1.1-201ENST00000613431 131 ntBASIC0.69□□□□□ -2.3
APOEP02649 AP000484.1-201ENST00000620067 1252 ntBASIC0.69□□□□□ -2.3
APOEP02649 AC006927.4-201ENST00000639187 543 ntBASIC0.69□□□□□ -2.3
APOEP02649 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.69□□□□□ -2.3
APOEP02649 MTND4P14-201ENST00000435799 1354 ntBASIC0.69□□□□□ -2.3
APOEP02649 RNU6-1141P-201ENST00000364520 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-1-201ENST00000383898 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-36P-201ENST00000384172 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-4P-201ENST00000384205 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-5P-201ENST00000384238 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-3P-201ENST00000384314 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-2-201ENST00000384627 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-9-201ENST00000384776 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-33P-201ENST00000384793 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 AC007283.2-201ENST00000424739 197 ntBASIC0.68□□□□□ -2.3
APOEP02649 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.68□□□□□ -2.3
APOEP02649 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.68□□□□□ -2.3
APOEP02649 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
APOEP02649 RNA5SP168-201ENST00000516642 112 ntBASIC0.68□□□□□ -2.3
APOEP02649 RN7SKP49-201ENST00000516675 260 ntBASIC0.68□□□□□ -2.3
APOEP02649 ZNF519P3-201ENST00000557158 1032 ntBASIC0.68□□□□□ -2.3
APOEP02649 AC090888.2-201ENST00000559765 1144 ntBASIC0.68□□□□□ -2.3
APOEP02649 MIR3923-201ENST00000579521 83 ntBASIC0.68□□□□□ -2.3
APOEP02649 MIR4742-201ENST00000581069 85 ntBASIC0.68□□□□□ -2.3
APOEP02649 SNORA4-201ENST00000584302 138 ntBASIC0.68□□□□□ -2.3
APOEP02649 RNU6-6P-201ENST00000606623 107 ntBASIC0.68□□□□□ -2.3
APOEP02649 AC009541.1-201ENST00000438279 2662 ntBASIC0.67□□□□□ -2.3
APOEP02649 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
APOEP02649 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
APOEP02649 SNORA33-201ENST00000363664 130 ntBASIC0.67□□□□□ -2.3
APOEP02649 RNU6-378P-201ENST00000384324 107 ntBASIC0.67□□□□□ -2.3
APOEP02649 RNU6-910P-201ENST00000390844 107 ntBASIC0.67□□□□□ -2.3
APOEP02649 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.67□□□□□ -2.3
APOEP02649 AC091435.1-201ENST00000505442 584 ntBASIC0.67□□□□□ -2.3
APOEP02649 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
APOEP02649 AC011406.1-201ENST00000512440 370 ntBASIC0.67□□□□□ -2.3
APOEP02649 SNORA31.2-201ENST00000516019 134 ntBASIC0.67□□□□□ -2.3
APOEP02649 RNU6-856P-201ENST00000516959 98 ntBASIC0.67□□□□□ -2.3
APOEP02649 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
APOEP02649 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.67□□□□□ -2.3
APOEP02649 AC078795.3-201ENST00000602913 472 ntBASIC0.67□□□□□ -2.3
APOEP02649 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.67□□□□□ -2.3
APOEP02649 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms