Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 Y_RNA.332-201ENST00000365271 113 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 RNU6-1042P-201ENST00000384204 107 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 SNORA12.2-201ENST00000391040 156 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 MTCO3P40-201ENST00000392516 676 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AL357139.1-201ENST00000407792 426 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AL445646.1-201ENST00000431784 216 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 SNRPEP8-201ENST00000442866 260 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 MTND2P22-201ENST00000444325 1033 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 RNA5SP57-201ENST00000459463 123 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AC132942.1-201ENST00000486753 483 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AC104576.1-201ENST00000524225 88 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AC087441.2-201ENST00000529141 262 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AC025423.5-201ENST00000550230 219 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 MIR3169-201ENST00000578032 83 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 MIR5692C1-201ENST00000585309 91 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 OR5AK4P-201ENST00000635912 903 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 MIR340-201ENST00000362125 95 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 U3.9-201ENST00000363823 204 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-82P-201ENST00000363970 107 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 MIR583-201ENST00000384846 75 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-780P-201ENST00000391030 104 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-648P-201ENST00000410190 107 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 UBE2V1P4-201ENST00000425374 344 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 FTH1P25-201ENST00000447665 469 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-1037P-201ENST00000459571 107 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC007547.1-201ENST00000462177 490 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RPS29P27-201ENST00000463711 170 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RPL9P9-202ENST00000466501 579 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC104564.1-201ENST00000493028 407 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC021146.2-201ENST00000504736 556 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-1098P-201ENST00000516772 96 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 RNU6-612P-201ENST00000516909 102 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 HSBP1P1-201ENST00000555205 166 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC027807.1-201ENST00000559921 996 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 NBR2-204ENST00000587322 63 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 BNIP3P25-201ENST00000596023 559 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 CYP2C61P-201ENST00000604072 290 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AL357078.3-201ENST00000607528 618 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC103591.3-201ENST00000608684 209 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC092807.2-201ENST00000609367 243 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC130454.1-201ENST00000622948 401 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
HLA-DQA1P01909 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQA1P01909 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 MTND4P23-201ENST00000447723 1363 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 RNU6-1085P-201ENST00000363576 107 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 RNU6-1329P-201ENST00000365664 107 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AL356432.1-201ENST00000405809 419 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 RNU6-1068P-201ENST00000410958 103 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 MTCO3P41-201ENST00000414801 328 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC123900.1-201ENST00000420390 96 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 OOSP1P1-201ENST00000423265 274 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 TIMM9P3-201ENST00000428659 274 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 MTND3P9-201ENST00000429526 346 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AL035666.1-201ENST00000446195 348 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AL513124.1-201ENST00000450410 614 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 TOMM22P6-201ENST00000465035 409 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC107401.1-201ENST00000503426 685 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC005741.1-201ENST00000511094 432 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC092436.3-201ENST00000511788 257 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC025465.4-201ENST00000513422 638 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC087854.1-201ENST00000519706 414 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 EIF4A1P12-201ENST00000551910 141 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC021231.3-201ENST00000558497 370 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 CYP4A27P-201ENST00000567218 190 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC022254.1-201ENST00000567857 235 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC103810.8-201ENST00000607347 118 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 uc_338.5-201ENST00000611839 155 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC022513.1-201ENST00000624512 117 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 LINC02555-201ENST00000563933 1951 ntBASIC1.26□□□□□ -2.21
HLA-DQA1P01909 AC245060.5-201ENST00000610778 3293 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 RNU6-1317P-201ENST00000364582 104 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.481-201ENST00000384373 102 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 RNU6-1106P-201ENST00000390845 107 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 MIR208B-201ENST00000401172 77 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms