Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR140-201ENST00000385282 100 ntBASIC-0.13□□□□□ -2.43
TNFP01375 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
TNFP01375 AC068533.2-201ENST00000411872 306 ntBASIC-0.13□□□□□ -2.43
TNFP01375 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.13□□□□□ -2.43
TNFP01375 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.13□□□□□ -2.43
TNFP01375 snoU13.25-201ENST00000458945 104 ntBASIC-0.13□□□□□ -2.43
TNFP01375 HMGB1P29-201ENST00000505659 499 ntBASIC-0.13□□□□□ -2.43
TNFP01375 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.13□□□□□ -2.43
TNFP01375 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
TNFP01375 uc_338.34-201ENST00000617467 174 ntBASIC-0.13□□□□□ -2.43
TNFP01375 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TNFP01375 AC092268.1-201ENST00000342691 405 ntBASIC-0.14□□□□□ -2.43
TNFP01375 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
TNFP01375 RNA5SP62-201ENST00000363457 110 ntBASIC-0.14□□□□□ -2.43
TNFP01375 SNORA42.1-201ENST00000363515 137 ntBASIC-0.14□□□□□ -2.43
TNFP01375 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
TNFP01375 RNU6-177P-201ENST00000411257 104 ntBASIC-0.14□□□□□ -2.43
TNFP01375 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.14□□□□□ -2.43
TNFP01375 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.14□□□□□ -2.43
TNFP01375 HMGN1P12-201ENST00000499125 195 ntBASIC-0.14□□□□□ -2.43
TNFP01375 AC023157.2-201ENST00000540596 141 ntBASIC-0.14□□□□□ -2.43
TNFP01375 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.14□□□□□ -2.43
TNFP01375 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.14□□□□□ -2.43
TNFP01375 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.14□□□□□ -2.43
TNFP01375 AC010975.3-201ENST00000618727 978 ntBASIC-0.14□□□□□ -2.43
TNFP01375 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
TNFP01375 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TNFP01375 SNORD114-5-201ENST00000362928 70 ntBASIC-0.15□□□□□ -2.43
TNFP01375 SNORA33-201ENST00000363664 130 ntBASIC-0.15□□□□□ -2.43
TNFP01375 MIR520F-201ENST00000384824 87 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RPS3AP36-201ENST00000398190 775 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AL079342.2-201ENST00000403367 482 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.15□□□□□ -2.43
TNFP01375 AC019070.1-201ENST00000415008 1024 ntBASIC-0.15□□□□□ -2.43
TNFP01375 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC007000.2-201ENST00000442564 487 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC003071.1-201ENST00000451219 789 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC010531.2-201ENST00000465012 153 ntBASIC-0.15□□□□□ -2.43
TNFP01375 TRBVB-201ENST00000477100 408 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RPL23AP54-201ENST00000495129 419 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RNA5SP285-201ENST00000516619 119 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.15□□□□□ -2.43
TNFP01375 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.15□□□□□ -2.43
TNFP01375 AL929325.1-201ENST00000603096 117 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC008147.4-201ENST00000617570 1204 ntBASIC-0.15□□□□□ -2.43
TNFP01375 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.15□□□□□ -2.43
TNFP01375 AL157786.1-207ENST00000627771 695 ntBASIC-0.15□□□□□ -2.43
TNFP01375 RNU4-15P-201ENST00000362613 141 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU6-549P-201ENST00000384433 107 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.16□□□□□ -2.44
TNFP01375 MIR329-2-201ENST00000385029 84 ntBASIC-0.16□□□□□ -2.44
TNFP01375 SNORA12.1-201ENST00000390873 148 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU6-700P-201ENST00000391043 107 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU4-27P-201ENST00000410889 139 ntBASIC-0.16□□□□□ -2.44
TNFP01375 DPRXP1-201ENST00000426312 460 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.16□□□□□ -2.44
TNFP01375 ART2BP-201ENST00000453501 499 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AP000797.1-201ENST00000478870 387 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.16□□□□□ -2.44
TNFP01375 SNORA70.12-201ENST00000516084 153 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL133153.1-201ENST00000557756 303 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL390123.1-201ENST00000603216 237 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL357312.1-201ENST00000603879 298 ntBASIC-0.16□□□□□ -2.44
TNFP01375 RNU4-5P-201ENST00000607255 135 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL354696.1-201ENST00000614652 497 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AC120349.2-201ENST00000625002 298 ntBASIC-0.16□□□□□ -2.44
TNFP01375 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.16□□□□□ -2.44
TNFP01375 MIR4315-1-201ENST00000636800 73 ntBASIC-0.16□□□□□ -2.44
TNFP01375 MIR4315-2-201ENST00000640925 73 ntBASIC-0.16□□□□□ -2.44
TNFP01375 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.17□□□□□ -2.44
TNFP01375 MIR653-201ENST00000385279 96 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AL359704.1-201ENST00000411586 781 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC027644.1-201ENST00000419595 298 ntBASIC-0.17□□□□□ -2.44
TNFP01375 Z99497.1-201ENST00000421282 135 ntBASIC-0.17□□□□□ -2.44
TNFP01375 RPL23AP50-201ENST00000434149 455 ntBASIC-0.17□□□□□ -2.44
TNFP01375 RPL37P21-201ENST00000435890 276 ntBASIC-0.17□□□□□ -2.44
TNFP01375 MTCO3P43-201ENST00000440974 771 ntBASIC-0.17□□□□□ -2.44
TNFP01375 RPL39P39-201ENST00000455840 151 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC021146.8-201ENST00000507455 733 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.17□□□□□ -2.44
TNFP01375 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.17□□□□□ -2.44
TNFP01375 SCARNA8-201ENST00000515924 131 ntBASIC-0.17□□□□□ -2.44
TNFP01375 SNORA31.10-201ENST00000516482 106 ntBASIC-0.17□□□□□ -2.44
TNFP01375 SNORA76.2-201ENST00000517095 137 ntBASIC-0.17□□□□□ -2.44
TNFP01375 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.17□□□□□ -2.44
TNFP01375 MTND4LP26-201ENST00000518144 282 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC069113.3-201ENST00000521019 150 ntBASIC-0.17□□□□□ -2.44
TNFP01375 MTND2P7-201ENST00000521337 640 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.17□□□□□ -2.44
TNFP01375 AC141557.1-201ENST00000540982 400 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC016256.1-201ENST00000547971 354 ntBASIC-0.17□□□□□ -2.44
TNFP01375 ZNF971P-201ENST00000562068 1249 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC092447.9-201ENST00000603395 144 ntBASIC-0.17□□□□□ -2.44
TNFP01375 AC106754.2-201ENST00000623006 233 ntBASIC-0.17□□□□□ -2.44
TNFP01375 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
TNFP01375 SNORA2A-201ENST00000383885 135 ntBASIC-0.18□□□□□ -2.44
TNFP01375 SNORA32.2-201ENST00000384049 122 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms