Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
LDLRP01130 Y_RNA.708-201ENST00000516950 96 ntBASIC2.58□□□□□ -2
LDLRP01130 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.58□□□□□ -2
LDLRP01130 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.58□□□□□ -2
LDLRP01130 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.58□□□□□ -2
LDLRP01130 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.58□□□□□ -2
LDLRP01130 BNIP3P16-201ENST00000589779 534 ntBASIC2.58□□□□□ -2
LDLRP01130 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
LDLRP01130 AC011494.1-201ENST00000596454 237 ntBASIC2.58□□□□□ -2
LDLRP01130 AL391813.1-201ENST00000603098 260 ntBASIC2.58□□□□□ -2
LDLRP01130 AC124312.5-201ENST00000604451 268 ntBASIC2.58□□□□□ -2
LDLRP01130 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.58□□□□□ -2
LDLRP01130 AC006157.1-201ENST00000611750 366 ntBASIC2.58□□□□□ -2
LDLRP01130 SCARNA17.4-201ENST00000614296 143 ntBASIC2.58□□□□□ -2
LDLRP01130 AC133104.2-201ENST00000615272 193 ntBASIC2.58□□□□□ -2
LDLRP01130 AC064859.1-201ENST00000624741 174 ntBASIC2.58□□□□□ -2
LDLRP01130 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
LDLRP01130 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
LDLRP01130 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
LDLRP01130 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LDLRP01130 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
LDLRP01130 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
LDLRP01130 RNU6-1059P-201ENST00000363752 98 ntBASIC2.57□□□□□ -2
LDLRP01130 RNU6-1318P-201ENST00000365389 103 ntBASIC2.57□□□□□ -2
LDLRP01130 Y_RNA.364-201ENST00000365532 101 ntBASIC2.57□□□□□ -2
LDLRP01130 RNU6-784P-201ENST00000384330 106 ntBASIC2.57□□□□□ -2
LDLRP01130 RNU6-306P-201ENST00000384617 107 ntBASIC2.57□□□□□ -2
LDLRP01130 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.57□□□□□ -2
LDLRP01130 AC008267.5-201ENST00000424928 265 ntBASIC2.57□□□□□ -2
LDLRP01130 USP9YP30-201ENST00000430729 455 ntBASIC2.57□□□□□ -2
LDLRP01130 AC004383.1-201ENST00000438135 289 ntBASIC2.57□□□□□ -2
LDLRP01130 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
LDLRP01130 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.57□□□□□ -2
LDLRP01130 AC107626.1-201ENST00000471084 183 ntBASIC2.57□□□□□ -2
LDLRP01130 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.57□□□□□ -2
LDLRP01130 RPL23AP49-201ENST00000492925 468 ntBASIC2.57□□□□□ -2
LDLRP01130 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.57□□□□□ -2
LDLRP01130 AC087854.1-201ENST00000519706 414 ntBASIC2.57□□□□□ -2
LDLRP01130 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.57□□□□□ -2
LDLRP01130 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
LDLRP01130 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.57□□□□□ -2
LDLRP01130 U4.1-201ENST00000620349 87 ntBASIC2.57□□□□□ -2
LDLRP01130 AC097372.5-201ENST00000623665 376 ntBASIC2.57□□□□□ -2
LDLRP01130 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.57□□□□□ -2
LDLRP01130 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.57□□□□□ -2
LDLRP01130 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
LDLRP01130 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.56□□□□□ -2
LDLRP01130 RNU6-859P-201ENST00000362728 107 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-428P-201ENST00000362942 107 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-527P-201ENST00000363425 104 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-827P-201ENST00000365553 106 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-842P-201ENST00000384269 107 ntBASIC2.56□□□□□ -2
LDLRP01130 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.56□□□□□ -2
LDLRP01130 MTCYBP10-201ENST00000424905 650 ntBASIC2.56□□□□□ -2
LDLRP01130 CBX3P6-201ENST00000430257 527 ntBASIC2.56□□□□□ -2
LDLRP01130 AL359672.1-201ENST00000442302 409 ntBASIC2.56□□□□□ -2
LDLRP01130 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.56□□□□□ -2
LDLRP01130 OSTCP8-201ENST00000445117 448 ntBASIC2.56□□□□□ -2
LDLRP01130 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
LDLRP01130 U8.20-201ENST00000459445 131 ntBASIC2.56□□□□□ -2
LDLRP01130 MED28P2-201ENST00000475771 317 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-377P-201ENST00000515965 102 ntBASIC2.56□□□□□ -2
LDLRP01130 Y_RNA.661-201ENST00000516003 99 ntBASIC2.56□□□□□ -2
LDLRP01130 SCARNA16.2-201ENST00000516520 172 ntBASIC2.56□□□□□ -2
LDLRP01130 RNU6-794P-201ENST00000517261 64 ntBASIC2.56□□□□□ -2
LDLRP01130 AC104576.1-201ENST00000524225 88 ntBASIC2.56□□□□□ -2
LDLRP01130 AC026371.1-201ENST00000551867 419 ntBASIC2.56□□□□□ -2
LDLRP01130 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LDLRP01130 AC113195.1-201ENST00000579952 141 ntBASIC2.56□□□□□ -2
LDLRP01130 AC018889.1-201ENST00000605372 397 ntBASIC2.56□□□□□ -2
LDLRP01130 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.56□□□□□ -2
LDLRP01130 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LDLRP01130 AL161423.1-201ENST00000613700 262 ntBASIC2.56□□□□□ -2
LDLRP01130 PISRT1.1-201ENST00000616930 107 ntBASIC2.56□□□□□ -2
LDLRP01130 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
LDLRP01130 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
LDLRP01130 SNORD62.1-201ENST00000362541 86 ntBASIC2.55□□□□□ -2
LDLRP01130 SNORD56.1-201ENST00000362913 68 ntBASIC2.55□□□□□ -2
LDLRP01130 RNU6-490P-201ENST00000362985 107 ntBASIC2.55□□□□□ -2
LDLRP01130 Y_RNA.80-201ENST00000362996 102 ntBASIC2.55□□□□□ -2
LDLRP01130 Y_RNA.485-201ENST00000384395 102 ntBASIC2.55□□□□□ -2
LDLRP01130 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
LDLRP01130 MT-TG-201ENST00000387429 68 ntBASIC2.55□□□□□ -2
LDLRP01130 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LDLRP01130 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.55□□□□□ -2
LDLRP01130 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.55□□□□□ -2
LDLRP01130 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.55□□□□□ -2
LDLRP01130 AC006026.2-201ENST00000457376 180 ntBASIC2.55□□□□□ -2
LDLRP01130 AL441985.1-201ENST00000457727 251 ntBASIC2.55□□□□□ -2
LDLRP01130 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.55□□□□□ -2
LDLRP01130 RNU7-187P-201ENST00000458985 68 ntBASIC2.55□□□□□ -2
LDLRP01130 snoU13.15-201ENST00000459407 104 ntBASIC2.55□□□□□ -2
LDLRP01130 AP001324.2-201ENST00000461163 319 ntBASIC2.55□□□□□ -2
LDLRP01130 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
LDLRP01130 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.55□□□□□ -2
LDLRP01130 SNORA25.11-201ENST00000515935 105 ntBASIC2.55□□□□□ -2
LDLRP01130 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
LDLRP01130 SNORA31.6-201ENST00000516241 130 ntBASIC2.55□□□□□ -2
LDLRP01130 RNU1-54P-201ENST00000517181 120 ntBASIC2.55□□□□□ -2
LDLRP01130 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms