Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC074117.2-201ENST00000417130 397 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
CNOT4O95628 MTCO1P5-201ENST00000433573 344 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AC007969.2-201ENST00000441891 191 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 TMSB4XP3-201ENST00000445144 114 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.34□□□□□ -1.87
CNOT4O95628 U8.18-201ENST00000459285 133 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 SCARNA14-201ENST00000516903 136 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AC022559.1-201ENST00000520905 205 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 UBL5P4-201ENST00000562584 236 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 MIR5571-201ENST00000577998 113 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 MIR4282-201ENST00000583613 67 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.34□□□□□ -1.87
CNOT4O95628 AL138963.2-201ENST00000605137 226 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AC011921.3-201ENST00000605540 361 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 IGHVIII-44-202ENST00000636235 289 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNOT4O95628 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNOT4O95628 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNOT4O95628 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
CNOT4O95628 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CNOT4O95628 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CNOT4O95628 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 MIR410-201ENST00000362222 80 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RNU6-858P-201ENST00000362436 107 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.82-201ENST00000363000 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.92-201ENST00000363043 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.230-201ENST00000364348 109 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.235-201ENST00000364412 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.306-201ENST00000365015 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.312-201ENST00000365089 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.322-201ENST00000365151 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RNU6-20P-201ENST00000384106 107 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 MIR329-1-201ENST00000385028 80 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RNA5SP424-201ENST00000390988 115 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RPL19P1-201ENST00000411635 428 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.33□□□□□ -1.88
CNOT4O95628 GPM6BP3-201ENST00000442797 145 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.650-201ENST00000459002 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.638-201ENST00000459374 113 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 SNRPGP7-201ENST00000469016 106 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AC091959.1-201ENST00000495857 238 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.777-201ENST00000516982 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RNU6-58P-201ENST00000517143 103 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 CR383656.8-201ENST00000549046 145 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 HSPE1P4-201ENST00000550617 308 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.33□□□□□ -1.88
CNOT4O95628 AL451007.1-201ENST00000595491 289 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 AC008749.1-201ENST00000597650 306 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.771-201ENST00000598668 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 U3.45-201ENST00000607547 219 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 Y_RNA.789-201ENST00000622480 102 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNOT4O95628 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
CNOT4O95628 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT4O95628 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CNOT4O95628 UBE2WP1-201ENST00000362030 340 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 Y_RNA.170-201ENST00000363746 110 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RNU6-961P-201ENST00000363893 105 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RNU6-1141P-201ENST00000364520 107 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RNU6-1175P-201ENST00000365200 107 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 Y_RNA.418-201ENST00000384029 102 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 Y_RNA.446-201ENST00000384178 104 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RNU6-1145P-201ENST00000384246 107 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 MIR487A-201ENST00000385009 80 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 SNORA46.1-201ENST00000391069 153 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AC023141.4-201ENST00000412031 328 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT4O95628 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AL606753.1-201ENST00000427435 87 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AL353705.1-201ENST00000433468 480 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC016632.1-201ENST00000503994 196 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 SEM1P1-201ENST00000506694 209 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 PHBP14-201ENST00000512887 367 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 Y_RNA.662-201ENST00000516028 97 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 RNU6-1198P-201ENST00000516904 67 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.32□□□□□ -1.88
CNOT4O95628 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNOT4O95628 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC021739.1-201ENST00000559631 174 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.32□□□□□ -1.88
CNOT4O95628 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.32□□□□□ -1.88
CNOT4O95628 MZT1P2-201ENST00000604387 248 ntBASIC3.32□□□□□ -1.88
CNOT4O95628 SNORA62.6-201ENST00000606322 83 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms