Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RNU4-76P-201ENST00000364509 141 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 RNU6-793P-201ENST00000384233 104 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
SIX6O95475 RNA5SP109-201ENST00000391010 116 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AL355796.1-201ENST00000406706 323 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC010154.1-201ENST00000425857 269 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC079776.3-201ENST00000450665 370 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 SNRPGP9-201ENST00000456025 225 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 RNU7-14P-201ENST00000459331 62 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.13□□□□□ -2.43
SIX6O95475 MTND3P5-201ENST00000512798 333 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC106038.2-201ENST00000520706 568 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC016256.1-201ENST00000547971 354 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 SUB1P2-201ENST00000556401 297 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC109446.1-201ENST00000566172 220 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC110760.3-201ENST00000598794 467 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC091805.2-201ENST00000603848 235 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 MIR6718-201ENST00000616153 80 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AL603839.4-201ENST00000624658 1005 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 AC010487.4-201ENST00000637027 61 ntBASIC-0.13□□□□□ -2.43
SIX6O95475 MIR16-2-201ENST00000362117 81 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 SNORA33-201ENST00000363664 130 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RNU6-289P-201ENST00000364093 107 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RNU6-877P-201ENST00000383868 107 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AL359704.1-201ENST00000411586 781 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 DEFB130D-201ENST00000426866 237 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RPL31P35-201ENST00000431058 377 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RPL23AP50-201ENST00000434149 455 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AC007969.2-201ENST00000441891 191 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 SNRPGP12-201ENST00000449481 213 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AK3P2-201ENST00000507976 429 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.14□□□□□ -2.43
SIX6O95475 RNU1-86P-201ENST00000516108 154 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RNU1-107P-201ENST00000516617 154 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 RNU6-677P-201ENST00000516914 101 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AC021451.1-201ENST00000523498 1129 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
SIX6O95475 AC016957.1-201ENST00000534895 309 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.14□□□□□ -2.43
SIX6O95475 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.14□□□□□ -2.43
SIX6O95475 AL357312.1-201ENST00000603879 298 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AL138889.2-201ENST00000603883 242 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AL162730.1-201ENST00000605734 292 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AC124016.2-201ENST00000610058 665 ntBASIC-0.14□□□□□ -2.43
SIX6O95475 AC027514.1-201ENST00000588561 1603 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 MIR653-201ENST00000385279 96 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 RNU6-278P-201ENST00000390945 109 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 RNA5SP504-201ENST00000410676 117 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 ZNF886P-201ENST00000450781 723 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC245047.8-201ENST00000456455 284 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC093899.1-201ENST00000457984 376 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC022447.4-201ENST00000504053 364 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC093534.1-201ENST00000504977 132 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.15□□□□□ -2.43
SIX6O95475 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 RNU4-77P-201ENST00000516692 156 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC027419.1-201ENST00000522976 328 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.15□□□□□ -2.43
SIX6O95475 AL606834.3-201ENST00000602615 496 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 SNRPGP20-201ENST00000604477 205 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC090186.1-201ENST00000605991 572 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 MIR15A-201ENST00000607334 83 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC104073.3-201ENST00000610942 955 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AL354696.1-201ENST00000614652 497 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 AC073349.3-201ENST00000617616 186 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.15□□□□□ -2.43
SIX6O95475 MIR4315-1-201ENST00000636800 73 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
SIX6O95475 MIR4315-2-201ENST00000640925 73 ntBASIC-0.15□□□□□ -2.43
SIX6O95475 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.15□□□□□ -2.43
SIX6O95475 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.15□□□□□ -2.43
SIX6O95475 MTND5P33-201ENST00000571250 1450 ntBASIC-0.16□□□□□ -2.43
SIX6O95475 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 RNU4-48P-201ENST00000365559 182 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 MIR544A-201ENST00000384855 91 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 AL451046.2-201ENST00000403074 277 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 RNU6-177P-201ENST00000411257 104 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.16□□□□□ -2.44
SIX6O95475 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.16□□□□□ -2.44
SIX6O95475 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.16□□□□□ -2.44
SIX6O95475 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.16□□□□□ -2.44
SIX6O95475 AL133217.1-201ENST00000450980 425 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 AL163973.1-201ENST00000484753 577 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 HMGB1P29-201ENST00000505659 499 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 DEFB108A-201ENST00000530110 222 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
SIX6O95475 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms