Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC021231.3-201ENST00000558497 370 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC109446.2-201ENST00000567872 497 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC078795.3-201ENST00000602913 472 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.32□□□□□ -2.2
SNX4O95219 AC008250.2-201ENST00000615261 205 ntBASIC1.32□□□□□ -2.2
SNX4O95219 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC022418.1-201ENST00000624118 445 ntBASIC1.32□□□□□ -2.2
SNX4O95219 AC095038.3-201ENST00000634439 195 ntBASIC1.32□□□□□ -2.2
SNX4O95219 RNU6-1097P-201ENST00000363586 107 ntBASIC1.31□□□□□ -2.2
SNX4O95219 RNU4-13P-201ENST00000364019 141 ntBASIC1.31□□□□□ -2.2
SNX4O95219 MIR548B-201ENST00000385247 97 ntBASIC1.31□□□□□ -2.2
SNX4O95219 AP1B1P2-201ENST00000416196 106 ntBASIC1.31□□□□□ -2.2
SNX4O95219 Z99497.1-201ENST00000421282 135 ntBASIC1.31□□□□□ -2.2
SNX4O95219 AC015922.2-201ENST00000435593 184 ntBASIC1.31□□□□□ -2.2
SNX4O95219 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.31□□□□□ -2.2
SNX4O95219 RNA5SP503-201ENST00000517047 117 ntBASIC1.31□□□□□ -2.2
SNX4O95219 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.31□□□□□ -2.2
SNX4O95219 MIR4775-201ENST00000581168 75 ntBASIC1.31□□□□□ -2.2
SNX4O95219 AC064807.4-201ENST00000607201 407 ntBASIC1.31□□□□□ -2.2
SNX4O95219 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.31□□□□□ -2.2
SNX4O95219 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.31□□□□□ -2.2
SNX4O95219 RNU6-1303P-201ENST00000364841 107 ntBASIC1.3□□□□□ -2.2
SNX4O95219 RNU6-434P-201ENST00000384376 107 ntBASIC1.3□□□□□ -2.2
SNX4O95219 RNU6-393P-201ENST00000384475 107 ntBASIC1.3□□□□□ -2.2
SNX4O95219 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AL117339.3-201ENST00000418733 162 ntBASIC1.3□□□□□ -2.2
SNX4O95219 MTCYBP1-201ENST00000454315 1119 ntBASIC1.3□□□□□ -2.2
SNX4O95219 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AC010531.2-201ENST00000465012 153 ntBASIC1.3□□□□□ -2.2
SNX4O95219 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.3□□□□□ -2.2
SNX4O95219 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AC079382.1-201ENST00000493346 557 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
SNX4O95219 SNORD27.1-201ENST00000516319 72 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.3□□□□□ -2.2
SNX4O95219 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.3□□□□□ -2.2
SNX4O95219 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.3□□□□□ -2.2
SNX4O95219 MIR3941-201ENST00000582572 103 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
SNX4O95219 Z98751.3-201ENST00000604447 521 ntBASIC1.3□□□□□ -2.2
SNX4O95219 MIR3976-201ENST00000606807 139 ntBASIC1.3□□□□□ -2.2
SNX4O95219 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AC004223.4-201ENST00000612426 332 ntBASIC1.3□□□□□ -2.2
SNX4O95219 AC005520.5-201ENST00000613926 164 ntBASIC1.3□□□□□ -2.2
SNX4O95219 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
SNX4O95219 MTND4P4-201ENST00000439033 1366 ntBASIC1.3□□□□□ -2.2
SNX4O95219 RNY4P34-201ENST00000364779 95 ntBASIC1.29□□□□□ -2.2
SNX4O95219 RNU6-108P-201ENST00000365558 107 ntBASIC1.29□□□□□ -2.2
SNX4O95219 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.29□□□□□ -2.2
SNX4O95219 RPS3AP3-201ENST00000411933 242 ntBASIC1.29□□□□□ -2.2
SNX4O95219 SNX2P2-201ENST00000424553 323 ntBASIC1.29□□□□□ -2.2
SNX4O95219 PRPS1P1-201ENST00000445305 876 ntBASIC1.29□□□□□ -2.2
SNX4O95219 snoU13.27-201ENST00000459278 104 ntBASIC1.29□□□□□ -2.2
SNX4O95219 Y_RNA.638-201ENST00000459374 113 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.29□□□□□ -2.2
SNX4O95219 AK3P2-201ENST00000507976 429 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.29□□□□□ -2.2
SNX4O95219 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.29□□□□□ -2.2
SNX4O95219 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
SNX4O95219 AC090517.1-201ENST00000569307 266 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AL022161.1-201ENST00000604390 213 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.29□□□□□ -2.2
SNX4O95219 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
SNX4O95219 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.29□□□□□ -2.2
SNX4O95219 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
SNX4O95219 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
SNX4O95219 FGF7P8-201ENST00000402994 292 ntBASIC1.28□□□□□ -2.2
SNX4O95219 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
SNX4O95219 MTND1P18-201ENST00000448191 573 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AL031274.1-201ENST00000450334 232 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AL162395.1-201ENST00000457882 422 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AC008628.2-201ENST00000502605 298 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.28□□□□□ -2.2
SNX4O95219 RNU6-856P-201ENST00000516959 98 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
SNX4O95219 TMF1P1-201ENST00000576058 373 ntBASIC1.28□□□□□ -2.2
SNX4O95219 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
SNX4O95219 BNIP3P10-201ENST00000605360 577 ntBASIC1.28□□□□□ -2.2
SNX4O95219 AC009994.1-201ENST00000606889 253 ntBASIC1.28□□□□□ -2.2
SNX4O95219 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNX4O95219 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
SNX4O95219 RNU6-74P-201ENST00000384235 107 ntBASIC1.27□□□□□ -2.21
SNX4O95219 Y_RNA.504-201ENST00000384481 104 ntBASIC1.27□□□□□ -2.21
SNX4O95219 Y_RNA.595-201ENST00000410403 105 ntBASIC1.27□□□□□ -2.21
SNX4O95219 COX6CP10-201ENST00000416832 224 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX4O95219 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX4O95219 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX4O95219 AL121601.2-201ENST00000438019 707 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AL163540.1-201ENST00000485382 386 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.27□□□□□ -2.21
SNX4O95219 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.27□□□□□ -2.21
SNX4O95219 AC108729.3-201ENST00000513484 108 ntBASIC1.27□□□□□ -2.21
SNX4O95219 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
SNX4O95219 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AC069113.1-201ENST00000517763 267 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.27□□□□□ -2.21
SNX4O95219 AC090115.3-201ENST00000553218 849 ntBASIC1.27□□□□□ -2.21
SNX4O95219 MIR4498-201ENST00000577599 66 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms