Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR5583-1-201ENST00000580941 59 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL356157.2-201ENST00000605122 111 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1BO75841 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL360219.1-201ENST00000610230 366 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL121890.5-201ENST00000620848 304 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
UPK1BO75841 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
UPK1BO75841 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK1BO75841 RNU6-545P-201ENST00000362681 104 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNU1-76P-201ENST00000362903 159 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNU1-96P-201ENST00000364163 162 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNU6-418P-201ENST00000384035 107 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNY3P10-201ENST00000384764 102 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 SNORA67.6-201ENST00000391093 99 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AL627390.1-201ENST00000396055 340 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNU6-248P-201ENST00000410720 107 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1BO75841 EBAG9P1-201ENST00000418955 543 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 MTND2P18-201ENST00000419962 1030 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AC133104.1-201ENST00000429100 218 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AC002486.1-201ENST00000435098 391 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1BO75841 AC007395.1-201ENST00000451333 677 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 OR2AQ1P-201ENST00000451972 200 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1BO75841 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1BO75841 RPS23P5-201ENST00000495419 428 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AC079140.2-201ENST00000506193 142 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
UPK1BO75841 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1BO75841 RPL39P5-202ENST00000512505 151 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1BO75841 AP002963.1-201ENST00000530590 184 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 RNU6-85P-201ENST00000605989 107 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AC009994.1-201ENST00000606889 253 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 AL078604.3-201ENST00000615580 211 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 uc_338.11-201ENST00000619132 160 ntBASIC1.08□□□□□ -2.24
UPK1BO75841 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
UPK1BO75841 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK1BO75841 Y_RNA.132-201ENST00000363421 102 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 Y_RNA.201-201ENST00000364052 96 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 SNORA18.2-201ENST00000383865 132 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 SNORA26.8-201ENST00000391306 124 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 ARL5AP1-201ENST00000418991 388 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1BO75841 CETN4P-201ENST00000432407 469 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 USP9YP28-201ENST00000435142 589 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC027119.1-201ENST00000440877 241 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 snoU13.6-201ENST00000458785 104 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 UBE2DNL-203ENST00000474922 222 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1BO75841 MTND1P22-201ENST00000510572 951 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC079140.3-201ENST00000511111 550 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1BO75841 RRN3P3-201ENST00000549207 578 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 MTND1P24-201ENST00000552175 861 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK1BO75841 AC091544.4-201ENST00000555268 342 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 MTCO3P23-201ENST00000561363 289 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK1BO75841 AC005668.1-201ENST00000571142 476 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 MIR3913-1-201ENST00000577744 102 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 MIR3937-201ENST00000580135 106 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC025449.1-201ENST00000603896 529 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC093424.1-201ENST00000604999 338 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 CTHRC1P1-201ENST00000605383 469 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AC009161.2-201ENST00000624626 138 ntBASIC1.07□□□□□ -2.24
UPK1BO75841 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK1BO75841 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.06□□□□□ -2.24
UPK1BO75841 FGF7P2-201ENST00000332473 296 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 Y_RNA.111-201ENST00000363248 100 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU6-1019P-201ENST00000364424 107 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 MIR504-201ENST00000385065 83 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 SNORD73A-201ENST00000386062 65 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU6-1093P-201ENST00000391194 107 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AL117342.1-201ENST00000404861 406 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU4-26P-201ENST00000410270 107 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK1BO75841 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK1BO75841 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC060773.1-201ENST00000421698 310 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC012306.1-201ENST00000423267 114 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.06□□□□□ -2.24
UPK1BO75841 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC022364.2-201ENST00000457963 554 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU1-123P-201ENST00000458950 160 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RPS29P21-201ENST00000496272 170 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.06□□□□□ -2.24
UPK1BO75841 RN7SKP287-201ENST00000516546 266 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 RNU6-567P-201ENST00000516746 107 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 SNORD60.2-201ENST00000516883 86 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 DEFB131C-201ENST00000528817 165 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms